RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 Q6ZWC4 215 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 CORO2AQ92828 525 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 RPL8P62917 257 aaKnown RBP9.7□□□□□ -0.86
XRCC3-208ENST00000554811 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 Q6ZN92 141 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 TMEM106BQ9NUM4 274 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 ZFYVE26Q68DK2 2539 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 RBP4P02753 201 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 P0C879 139 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 GLRXP35754 106 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 C17orf58Q2M2W7 97 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 TCTEX1D1Q8N7M0 179 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 PAXXQ9BUH6 204 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 TMEM167BQ9NRX6 74 aa9.7□□□□□ -0.86
XRCC3-208ENST00000554811 TEX50A0A1B0GTY4 177 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 CNIH1O95406 144 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 LYZP61626 148 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 C10orf113Q5VZT2 155 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 MCRIP2Q9BUT9 160 aaKnown RBP9.69□□□□□ -0.86
XRCC3-208ENST00000554811 AMMECR1Q9Y4X0 333 aaPredicted RBP9.69□□□□□ -0.86
XRCC3-208ENST00000554811 PRR7Q8TB68 274 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 FAM168AQ92567 244 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 DAZAP1Q96EP5 407 aaKnown RBP9.69□□□□□ -0.86
XRCC3-208ENST00000554811 RCHY1Q96PM5 261 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 IGKV1OR2-108A0A075B7D4 117 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 MUC21A0A0G2JKD1 596 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 MUC21A0A140T8X8 626 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 NDUFB3O43676 98 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 APCSP02743 223 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 CT45A6P0DMU7 189 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 CT45A5P0DMU8 189 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 CT45A7P0DMV0 189 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 MUC21Q5SSG8 566 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 PYGO2Q9BRQ0 406 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 RAB9BQ9NP90 201 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 LRBAP50851 2863 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 PTPN13Q12923 2485 aa9.69□□□□□ -0.86
XRCC3-208ENST00000554811 IGHV3OR16-8A0A075B7F1 116 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 PGPA6NDG6 321 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 C8orf88P0DMB2 117 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 KIR2DS2P43631 304 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 HES1Q14469 280 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 SP5Q6BEB4 398 aaPredicted RBP9.68□□□□□ -0.86
XRCC3-208ENST00000554811 TCF24Q7RTU0 167 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 NEUROG1Q92886 237 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 PLSCR4Q9NRQ2 329 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 TPSG1Q9NRR2 321 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 TMSB15BA0A087X1C1 80 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 A0A1W2PN81 502 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 E7EUB6 86 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 BRS3P32247 399 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 RPL15P61313 204 aaKnown RBP9.68□□□□□ -0.86
XRCC3-208ENST00000554811 FOXC1Q12948 553 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 SPATA45Q537H7 98 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 TMEM108Q6UXF1 575 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 CENPVQ7Z7K6 275 aaPredicted RBP9.68□□□□□ -0.86
XRCC3-208ENST00000554811 OR1L8Q8NGR8 309 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 ZNF714Q96N38 554 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 SELENOKQ9Y6D0 94 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 IGHV3-35A0A0C4DH35 117 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 PRRG2O14669 202 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 CD40P25942 277 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
XRCC3-208ENST00000554811 LYPD2Q6UXB3 125 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 PARD6GQ9BYG4 376 aaPredicted RBP9.68□□□□□ -0.86
XRCC3-208ENST00000554811 DNAJC4Q9NNZ3 241 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 ARL2-SNX15V9GYD0 113 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 RELNP78509 3460 aa9.68□□□□□ -0.86
XRCC3-208ENST00000554811 SETD2Q9BYW2 2564 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-208ENST00000554811 LOC102724200A0A096LPH7 203 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-208ENST00000554811 M0R2Z0 102 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 C1orf185Q5T7R7 199 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 SEM1Q6ZVN7 128 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 C22orf15Q8WYQ4 148 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 CORTO00230 105 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 UPK2O00526 184 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 TNFRSF1AP19438 455 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
XRCC3-208ENST00000554811 GFRALQ6UXV0 394 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 LINC00305Q7Z4B0 112 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 Q8N7P7 452 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 PMCHL2Q9BQD1 86 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 NRN1Q9NPD7 142 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 SH2D7A6NKC9 451 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-208ENST00000554811 WNT2P09544 360 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 BSPH1Q075Z2 132 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 FOXL1Q12952 345 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 TIMM23BQ5SRD1 257 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
XRCC3-208ENST00000554811 Q6ZVH6 145 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 ADTRPQ96IZ2 230 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 PGLYRP4Q96LB8 373 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 GAFA1Q96PS6 74 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 PRO3102Q9H379 93 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 GAL3ST2Q9H3Q3 398 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 FBXL7Q9UJT9 491 aa9.67□□□□□ -0.86
XRCC3-208ENST00000554811 ZZEF1O43149 2961 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms