RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MARCH1Q8TCQ1 289 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 RAB2BQ8WUD1 216 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 GATAD1Q8WUU5 269 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 SMIM4Q8WVI0 70 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 DIRAS2Q96HU8 199 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 NARS2Q96I59 477 aaKnown RBP8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 CSTL1Q9H114 145 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 VSIRQ9H7M9 311 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 STARD9Q9P2P6 4700 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 CXorf65A6NEN9 183 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 MPTX1A8MV57 137 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 CTDSP2O14595 271 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 CLN5O75503 358 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 AKAIN1P0CW23 69 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 RNASE2P10153 161 aaKnown RBP8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 OPRK1P41145 380 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 EIF2B2P49770 351 aaKnown RBP8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 TMBIM6P55061 237 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 IZUMO4Q1ZYL8 232 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 DEFB135Q30KP9 77 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 SP6Q3SY56 376 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 LYG2Q86SG7 212 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 OR4D10Q8NGI6 311 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 RBPMSQ93062 196 aaKnown RBP8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 METTL26Q96S19 204 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 LYSTQ99698 3801 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 NAA60Q9H7X0 242 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 RSL24D1Q9UHA3 163 aaKnown RBP8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 KCNIP3Q9Y2W7 256 aa8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 KLK5Q9Y337 293 aaPredicted RBP8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 PUS1Q9Y606 427 aaKnown RBP eCLIP8.05□□□□□ -1.12
VTI1BP3-201ENST00000550220 A0A0J9YWU9 116 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 IGHV3-48P01763 117 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 OR5AC1P0C628 307 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 SLC25A4P12235 298 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 RPL35AP18077 110 aaKnown RBP8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 TFPI2P48307 235 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 RPL11P62913 178 aaKnown RBP8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 IL18Q14116 193 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 SPINK9Q5DT21 86 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 ETFRF1Q6IPR1 90 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 RNASEH2CQ8TDP1 164 aaKnown RBP8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 GLYATL2Q8WU03 294 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 IL22RA2Q969J5 263 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 TMEM230Q96A57 120 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 GRAMD2BQ96HH9 432 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 RTBDNQ9BSG5 229 aaPredicted RBP8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 MIXL1Q9H2W2 232 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 HEYLQ9NQ87 328 aaPredicted RBP8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 CCDC59Q9P031 241 aaKnown RBP8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 SCP2D1Q9UJQ7 156 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 GPR132Q9UNW8 380 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 RYR2Q92736 4967 aa8.04□□□□□ -1.12
VTI1BP3-201ENST00000550220 IGHV3-49A0A0A0MS15 119 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 CRYM-AS1A6NIL9 109 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 GSTZ1O43708 216 aaPredicted RBP8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 NOL3O60936 208 aaKnown RBP8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 CRYBB3P26998 211 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 AP2S1P53680 142 aaPredicted RBP8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 SPCS2Q15005 226 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 BSXQ3C1V8 233 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 TMEM41BQ5BJD5 291 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 CEMP1Q6PRD7 247 aaPredicted RBP8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 CLVS1Q8IUQ0 354 aaPredicted RBP8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 SELENOHQ8IZQ5 122 aaKnown RBP8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 OR1S2Q8NGQ3 325 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 Q8WTZ3 238 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 ST8SIA2Q92186 375 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 ZNF414Q96IQ9 312 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 MS4A6AQ9H2W1 248 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 TMEM56-RWDD3S4R434 201 aa8.03□□□□□ -1.12
VTI1BP3-201ENST00000550220 SACSQ9NZJ4 4579 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 IGKV3-7A0A075B6H7 116 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 IGHV3OR16-13A0A075B7E8 117 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 IGHV3-74A0A0B4J1X5 117 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 HELTA6NFD8 242 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 CEBPZOSA8MTT3 80 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 ANXA3P12429 323 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 ATP5IP56385 69 aaPredicted RBP8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 YPEL3P61236 119 aaPredicted RBP8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 TMEM268Q5VZI3 342 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 Q6ZRM9 215 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 GBGT1Q8N5D6 347 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 SLC24A4Q8NFF2 622 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 OR4C16Q8NGL9 310 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 RARRES2Q99969 163 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 MFFQ9GZY8 342 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 CACNG5Q9UF02 275 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 U3KQ87 197 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 DNAH1Q9P2D7 4330 aa8.02□□□□□ -1.13
VTI1BP3-201ENST00000550220 A0A0G2JRQ6 117 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 A0A1B0GU03 582 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 ANKRD20A5PA0PJZ0 165 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 SULT1A3P0DMM9 295 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 SULT1A4P0DMN0 295 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms