RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MUC21A0A140T8X8 626 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 TYMSP04818 313 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 CA7P43166 264 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 MAJINQ3KP22 176 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 MUC21Q5SSG8 566 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 GCSAMQ8N6F7 178 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 SIGLECL1Q8N7X8 197 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 GNB4Q9HAV0 340 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 TECRQ9NZ01 308 aaKnown RBP9.05□□□□□ -0.96
LINC00661-204ENST00000549354 SAA2-SAA4A0A096LPE2 208 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 SAA2P0DJI9 122 aaPredicted RBP9.05□□□□□ -0.96
LINC00661-204ENST00000549354 SELENOVP59797 346 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 LBHQ53QV2 105 aaPredicted RBP9.05□□□□□ -0.96
LINC00661-204ENST00000549354 CENPWQ5EE01 88 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 ST6GALNAC6Q969X2 333 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 FBXL7Q9UJT9 491 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 CXorf1O96002 111 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 STAG3L2P0CL84 134 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 STAG3L3P0CL85 134 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 NPY1RP25929 384 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 ZNF137PP52743 207 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 RANP62826 216 aaKnown RBP9.04□□□□□ -0.96
LINC00661-204ENST00000549354 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
LINC00661-204ENST00000549354 MORN2Q502X0 79 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 DNLZQ5SXM8 178 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 MORN5Q5VZ52 161 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 STUMQ69YW2 141 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 LCN12Q6JVE5 192 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 TRAT1Q6PIZ9 186 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 GOLT1BQ9Y3E0 138 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 ZNF253O75346 499 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 MOSP00540 346 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 IGHV1-46P01743 117 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 GNG4P50150 75 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 GNG5P63218 68 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 FOXL1Q12952 345 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 OR4A47Q6IF82 309 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 CALYQ9NYX4 217 aa9.04□□□□□ -0.96
LINC00661-204ENST00000549354 TBL2Q9Y4P3 447 aaKnown RBP9.04□□□□□ -0.96
LINC00661-204ENST00000549354 DIRC3C9JPN6 131 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 J3QR06 171 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
LINC00661-204ENST00000549354 CT45A1Q5HYN5 189 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 TPTE2P1Q5T6R2 138 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 CT45A3Q8NHU0 189 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 PARD6GQ9BYG4 376 aaPredicted RBP9.03□□□□□ -0.96
LINC00661-204ENST00000549354 PRORYQ9H606 182 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 MYO18BQ8IUG5 2567 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 IGHV3-35A0A0C4DH35 117 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 HELTA6NFD8 242 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 SRRM4A7MD48 611 aaKnown RBP9.03□□□□□ -0.96
LINC00661-204ENST00000549354 LY6HO94772 140 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 RAB4AP20338 218 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 SRIP30626 198 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 ZBTB34Q8NCN2 500 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 TXN2Q99757 166 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 ZFHX3Q15911 3703 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 A0A1W2PN81 502 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 FOXA3P55318 350 aaPredicted RBP9.03□□□□□ -0.96
LINC00661-204ENST00000549354 BSPH1Q075Z2 132 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
LINC00661-204ENST00000549354 ADIPOQQ15848 244 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 TEPPQ6URK8 271 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 C1orf159Q96HA4 380 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 EAF1Q96JC9 268 aaPredicted RBP9.03□□□□□ -0.96
LINC00661-204ENST00000549354 TMEM68Q96MH6 324 aa9.03□□□□□ -0.96
LINC00661-204ENST00000549354 E7EUB6 86 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 TCF21O43680 179 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 OPRK1P41145 380 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 RELBQ01201 579 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 RPEL1Q2QD12 228 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 SLC24A4Q8NFF2 622 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 NPVFQ9HCQ7 196 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 IL36BQ9NZH7 164 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 C15orf65H3BRN8 121 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 DLL1O00548 723 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 TMEM183BQ1AE95 376 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 FAM168AQ92567 244 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 PMCHL2Q9BQD1 86 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 ZNF355PQ9NSJ1 428 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 OR51B2Q9Y5P1 312 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 CSN3P07498 182 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 BTF3P20290 206 aaKnown RBP9.02□□□□□ -0.97
LINC00661-204ENST00000549354 RHOBP62745 196 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 TNFAIP6P98066 277 aaPredicted RBP9.02□□□□□ -0.97
LINC00661-204ENST00000549354 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 NGBQ9NPG2 151 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 RNF7Q9UBF6 113 aa9.02□□□□□ -0.97
LINC00661-204ENST00000549354 USP9XQ93008 2570 aaPredicted RBP9.01□□□□□ -0.97
LINC00661-204ENST00000549354 MGST3O14880 152 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 VWC2Q2TAL6 325 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 LPAR2Q9HBW0 351 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 SLC35D1Q9NTN3 355 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 SH2D7A6NKC9 451 aaPredicted RBP9.01□□□□□ -0.97
LINC00661-204ENST00000549354 TNFSF4P23510 183 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 VDAC2P45880 294 aaPredicted RBP9.01□□□□□ -0.97
LINC00661-204ENST00000549354 SPATA45Q537H7 98 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms