RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SUB1P53999 127 aaKnown RBP eCLIP9.8□□□□□ -0.84
CPSF6-204ENST00000547486 CMC4P56277 68 aaPredicted RBP9.8□□□□□ -0.84
CPSF6-204ENST00000547486 BSXQ3C1V8 233 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 AARDQ4LEZ3 155 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
CPSF6-204ENST00000547486 CCDC71LQ8N9Z2 235 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 GLYATL2Q8WU03 294 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 C15orf40Q8WUR7 153 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 RRNAD1Q96FB5 475 aaKnown RBP9.8□□□□□ -0.84
CPSF6-204ENST00000547486 GINS3Q9BRX5 216 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 TMEM222Q9H0R3 208 aa9.8□□□□□ -0.84
CPSF6-204ENST00000547486 TEX13DA0A0J9YY54 714 aaPredicted RBP9.79□□□□□ -0.84
CPSF6-204ENST00000547486 MPTX1A8MV57 137 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 CLN5O75503 358 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 RPL5P46777 297 aaKnown RBP9.79□□□□□ -0.84
CPSF6-204ENST00000547486 HOXA1P49639 335 aaPredicted RBP9.79□□□□□ -0.84
CPSF6-204ENST00000547486 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 LEMD1Q68G75 181 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 GPR141Q7Z602 305 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 SELENOHQ8IZQ5 122 aaKnown RBP9.79□□□□□ -0.84
CPSF6-204ENST00000547486 OR4X1Q8NH49 305 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 GPR146Q96CH1 333 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 PDCD10Q9BUL8 212 aa9.79□□□□□ -0.84
CPSF6-204ENST00000547486 MRPS26Q9BYN8 205 aaKnown RBP9.79□□□□□ -0.84
CPSF6-204ENST00000547486 C6orf62Q9GZU0 229 aaPredicted RBP9.79□□□□□ -0.84
CPSF6-204ENST00000547486 ALMS1Q8TCU4 4167 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 CORTO00230 105 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 B3GALNT1O75752 331 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 LY6G6CO95867 125 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 IGKV1-17P01599 117 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 ATF4P18848 351 aaPredicted RBP9.78□□□□□ -0.84
CPSF6-204ENST00000547486 OPRK1P41145 380 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 DEFB131AP59861 70 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 SPCS3P61009 180 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 RPL11P62913 178 aaKnown RBP9.78□□□□□ -0.84
CPSF6-204ENST00000547486 SSBP1Q04837 148 aaKnown RBP9.78□□□□□ -0.84
CPSF6-204ENST00000547486 RNASE11Q8TAA1 199 aaKnown RBP9.78□□□□□ -0.84
CPSF6-204ENST00000547486 SMIM4Q8WVI0 70 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 NAA60Q9H7X0 242 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 ENY2Q9NPA8 101 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.78□□□□□ -0.84
CPSF6-204ENST00000547486 GPR132Q9UNW8 380 aa9.78□□□□□ -0.84
CPSF6-204ENST00000547486 NUPR2A6NF83 97 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 CRYM-AS1A6NIL9 109 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 DNASE2O00115 360 aaPredicted RBP9.77□□□□□ -0.85
CPSF6-204ENST00000547486 CD5P06127 495 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 NPPCP23582 126 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 MRPS10P82664 201 aaKnown RBP9.77□□□□□ -0.85
CPSF6-204ENST00000547486 MEF2DQ14814 521 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 TIGITQ495A1 244 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 FAM219AQ8IW50 185 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 OR4C16Q8NGL9 310 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 OR52E5Q8NH55 327 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 DYNC2LI1Q8TCX1 351 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 TMEM170AQ8WVE7 144 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 RBPMSQ93062 196 aaKnown RBP9.77□□□□□ -0.85
CPSF6-204ENST00000547486 DIRAS2Q96HU8 199 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 RARRES2Q99969 163 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 PRR13Q9NZ81 148 aa9.77□□□□□ -0.85
CPSF6-204ENST00000547486 C14orf166Q9Y224 244 aaKnown RBP9.77□□□□□ -0.85
CPSF6-204ENST00000547486 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 DISC1C4P0D8 188 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 CTDSPLO15194 276 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 AKAIN1P0CW23 69 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 CRYBB3P26998 211 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 DHODHQ02127 395 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 RBMS2Q15434 407 aaKnown RBP9.76□□□□□ -0.85
CPSF6-204ENST00000547486 SURF2Q15527 256 aaPredicted RBP9.76□□□□□ -0.85
CPSF6-204ENST00000547486 TMEM268Q5VZI3 342 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 PRSS54Q6PEW0 395 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 CLVS1Q8IUQ0 354 aaPredicted RBP9.76□□□□□ -0.85
CPSF6-204ENST00000547486 OR51S1Q8NGJ8 323 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 OR11H2Q8NH07 326 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 GATAD1Q8WUU5 269 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 TMEM230Q96A57 120 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 HEYLQ9NQ87 328 aaPredicted RBP9.76□□□□□ -0.85
CPSF6-204ENST00000547486 CACNG5Q9UF02 275 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 RABAC1Q9UI14 185 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 TMEM56-RWDD3S4R434 201 aa9.76□□□□□ -0.85
CPSF6-204ENST00000547486 ANKRD20A5PA0PJZ0 165 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 K7EQG2 157 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 DEFB4AO15263 64 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 NXPH3O95157 252 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 CA1P00915 261 aaPredicted RBP9.75□□□□□ -0.85
CPSF6-204ENST00000547486 GIG44P09565 113 aaPredicted RBP9.75□□□□□ -0.85
CPSF6-204ENST00000547486 HTR2BP41595 481 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 IL18Q14116 193 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 C2orf83Q53S99 150 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 TMEM217Q8N7C4 229 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 PHLDA1Q8WV24 401 aaPredicted RBP9.75□□□□□ -0.85
CPSF6-204ENST00000547486 METTL26Q96S19 204 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 U3KQE9 123 aa9.75□□□□□ -0.85
CPSF6-204ENST00000547486 A0A1W2PS18 150 aa9.74□□□□□ -0.85
CPSF6-204ENST00000547486 GSTZ1O43708 216 aaPredicted RBP9.74□□□□□ -0.85
CPSF6-204ENST00000547486 IGLC1P0CG04 106 aa9.74□□□□□ -0.85
CPSF6-204ENST00000547486 P2RY1P47900 373 aa9.74□□□□□ -0.85
CPSF6-204ENST00000547486 RND2P52198 227 aa9.74□□□□□ -0.85
CPSF6-204ENST00000547486 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
CPSF6-204ENST00000547486 TMEM187Q14656 261 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms