RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 IGLV2-23P01705 113 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 THBDP07204 575 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 LOXP28300 417 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 DLX6P56179 175 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 KIR2DL5AQ8N109 375 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 OR2T6Q8NHC8 308 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 C20orf144Q9BQM9 153 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 SERTAD4Q9NUC0 356 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 RALYQ9UKM9 306 aaKnown RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 HCFC1P51610 2035 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 DOCK11Q5JSL3 2073 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 IGHV1-69-2A0A0G2JMI3 117 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 M0R143 59 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 RPL27AP46776 148 aaKnown RBP10.53□□□□□ -0.72
CPSF7-223ENST00000544669 PLP1P60201 277 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 UBE2G1P62253 170 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 C19orf35Q6ZS72 473 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 C22orf34Q6ZV56 151 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 TMEM116Q8NCL8 245 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 ABHD17AQ96GS6 310 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 TNFRSF19Q9NS68 423 aa10.53□□□□□ -0.72
CPSF7-223ENST00000544669 MRPL27Q9P0M9 148 aaKnown RBP10.53□□□□□ -0.72
CPSF7-223ENST00000544669 SERF1AO75920 110 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 IGLV2-8P01709 118 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 APCSP02743 223 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 CD3EP07766 207 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 RAB4AP20338 218 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 GATA2P23769 480 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-223ENST00000544669 OR5I1Q13606 314 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 PRSS8Q16651 343 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 ZNF329Q86UD4 541 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 VKORC1Q9BQB6 163 aa10.52□□□□□ -0.73
CPSF7-223ENST00000544669 SLC25A17O43808 307 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 HYPMO75409 117 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 TBR1Q16650 682 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 CT83Q5H943 113 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 TEX43Q6ZNM6 134 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 LINC00305Q7Z4B0 112 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 MOB3BQ86TA1 216 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 SNRNP40Q96DI7 357 aaKnown RBP10.51□□□□□ -0.73
CPSF7-223ENST00000544669 TBX15Q96SF7 602 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 KLF12Q9Y4X4 402 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 ENSAO43768 121 aaKnown RBP10.51□□□□□ -0.73
CPSF7-223ENST00000544669 ZNF253O75346 499 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 GPX1P07203 203 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 NBL1P41271 181 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 REG1BP48304 166 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 MLANAQ16655 118 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 ST6GALNAC3Q8NDV1 305 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 OR4B1Q8NGF8 309 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 C8orf46Q8TAG6 207 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 FAM122AQ96E09 287 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 GPR82Q96P67 336 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 HSPB9Q9BQS6 159 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 CLEC7AQ9BXN2 247 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 RNASE7Q9H1E1 156 aaKnown RBP10.51□□□□□ -0.73
CPSF7-223ENST00000544669 INSIG2Q9Y5U4 225 aa10.51□□□□□ -0.73
CPSF7-223ENST00000544669 TANC2Q9HCD6 1990 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 NCOR1O75376 2440 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 FAM231BA6NCW3 169 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 K7EM74 188 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 TSKUQ8WUA8 353 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 KCNS1Q96KK3 526 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 WFIKKN1Q96NZ8 548 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 VAMP8Q9BV40 100 aa10.5□□□□□ -0.73
CPSF7-223ENST00000544669 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-223ENST00000544669 IGKV1D-37A0A075B6S9 117 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 A0A1W2PPI3 338 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 SHISA9B4DS77 424 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 MYCNOSP40205 109 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 LYPD2Q6UXB3 125 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 TOMM20LQ6UXN7 152 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 MIEN1Q9BRT3 115 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 ATG101Q9BSB4 218 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 POLR3KQ9Y2Y1 108 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-223ENST00000544669 DYSFO75923 2080 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 DSCAML1Q8TD84 2053 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 DSCAMO60469 2012 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 A8MWL6 223 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 E7EQL1 145 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 IGLV1-47P01700 117 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 CRYGBP07316 175 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 NBEAP1P0C6P0 100 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 PATE2Q6UY27 113 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 PPP1R27Q86WC6 154 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 BORCS7Q96B45 105 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 MBD6Q96DN6 1003 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 GFRA4Q9GZZ7 299 aa10.49□□□□□ -0.73
CPSF7-223ENST00000544669 GNB4Q9HAV0 340 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms