RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 DLX4Q92988 240 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-212ENST00000543766 PRSS27Q9BQR3 290 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 Q9UF83 564 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 COL4A2P08572 1712 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 SLC17A2O00624 439 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 SPINK4O60575 86 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 CBLN1P23435 193 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 NANOS3P60323 173 aaKnown RBP7.32□□□□□ -1.24
VPS13D-212ENST00000543766 KLRB1Q12918 225 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 CLLU1OSQ5K130 101 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 TMEM150AQ86TG1 271 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 ZNF563Q8TA94 476 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 LINC01587Q99440 93 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 RNF114Q9Y508 228 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 YTHDF2Q9Y5A9 579 aaKnown RBP7.32□□□□□ -1.24
VPS13D-212ENST00000543766 A0A0A6YYD5 115 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 A8MWV9 139 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 DPM2O94777 84 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 DANCRP0C864 163 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 FHL1Q13642 323 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 Q6ZQT7 251 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 APRG1Q8IVJ8 170 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 SLC22A24Q8N4F4 322 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 PROCRQ9UNN8 238 aa7.32□□□□□ -1.24
VPS13D-212ENST00000543766 A0A087WV48 116 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 A0A087WWL8 130 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 CRLF1O75462 422 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 CECR9P0C854 216 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 EDNRAP25101 427 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 TNFAIP6P98066 277 aaPredicted RBP7.31□□□□□ -1.24
VPS13D-212ENST00000543766 SPEM2Q0P670 501 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 TESK1Q15569 626 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 OR2T6Q8NHC8 308 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 TMEM255BQ8WV15 326 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 APOOQ9BUR5 198 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 F2Z2F3 143 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 NCKAP5O14513 1909 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 STK17BO94768 372 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 CRYGDP07320 174 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 LIFP15018 202 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 CNTFRP26992 372 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 LRRC29Q8WV35 223 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 GNB1LQ9BYB4 327 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 ZNF576Q9H609 170 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 TMEM178BH3BS89 294 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 HBG2P69892 147 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 RFLNAQ6ZTI6 216 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 CNTRLQ7Z7A1 2325 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 WDR87Q6ZQQ6 2873 aa7.31□□□□□ -1.24
VPS13D-212ENST00000543766 PRR32B1ATL7 298 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 DUTP33316 252 aaKnown RBP7.3□□□□□ -1.24
VPS13D-212ENST00000543766 EMDP50402 254 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 LOXL3P58215 753 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 OR4C11Q6IEV9 310 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 OR2A1Q8NGT9 310 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 RASL10AQ92737 203 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 SLC25A44Q96H78 314 aaPredicted RBP7.3□□□□□ -1.24
VPS13D-212ENST00000543766 NDUFB4O95168 129 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 TACSTD2P09758 323 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 RBMY1CP0DJD4 496 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 ZNF136P52737 540 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 CRIPAKQ8N1N5 446 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 SGMS2Q8NHU3 365 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 C16orf92Q96LL3 132 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 SPTBN5Q9NRC6 3674 aaKnown RBP7.3□□□□□ -1.24
VPS13D-212ENST00000543766 RBAKDNA6NC62 111 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 CPSF4LA6NMK7 179 aaKnown RBP7.3□□□□□ -1.24
VPS13D-212ENST00000543766 OR9G9P0C7N8 305 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 RPS4XP62701 263 aaKnown RBP7.3□□□□□ -1.24
VPS13D-212ENST00000543766 IER5LQ5T953 404 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 SGPP2Q8IWX5 399 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 MRPL30Q8TCC3 161 aaKnown RBP7.3□□□□□ -1.24
VPS13D-212ENST00000543766 AQP3Q92482 292 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 WDYHV1Q96HA8 205 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 TMEM242Q9NWH2 141 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 PRR14LQ5THK1 2151 aa7.3□□□□□ -1.24
VPS13D-212ENST00000543766 TIMM23O14925 209 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 NDUFB2O95178 105 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 IL3RAP26951 378 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 FOXC1Q12948 553 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 NMSQ5H8A3 153 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 FAM90A1Q86YD7 464 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 ZNF740Q8NDX6 193 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 C9orf85Q96MD7 179 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 PBOV1Q9GZY1 135 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
VPS13D-212ENST00000543766 OTORQ9NRC9 128 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 TNFRSF19Q9NS68 423 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 KLK13Q9UKR3 277 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 CHD7Q9P2D1 2997 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 PCSK4Q6UW60 755 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 OVCA2Q8WZ82 227 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 MRPL20Q9BYC9 149 aaKnown RBP7.29□□□□□ -1.24
VPS13D-212ENST00000543766 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 SH3BGRL3Q9H299 93 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 CACNG5Q9UF02 275 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 NCOR1O75376 2440 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 A8MWL6 223 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 SHISA9B4DS77 424 aa7.29□□□□□ -1.24
VPS13D-212ENST00000543766 MGST3O14880 152 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 572 ms