RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CLDND2Q8NHS1 167 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 PTH2Q96A98 100 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TICRRQ7Z2Z1 1910 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 H3BTX0 84 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TIMM23O14925 209 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 CD99P14209 185 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 CRISP2P16562 243 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 SRD5A1P18405 259 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TOMM20LQ6UXN7 152 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TBX15Q96SF7 602 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 ATG101Q9BSB4 218 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 IFI27L2Q9H2X8 130 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TRAV26-1A0A087WT03 109 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 NUDT3O95989 172 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 SRSF12Q8WXF0 261 aaKnown RBP5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 MRPL32Q9BYC8 188 aaKnown RBP5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TMEM178BH3BS89 294 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 CCL1P22362 96 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 MFAP2P55001 183 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 GNG5P63218 68 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 OR10J3Q5JRS4 329 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 GALNT14Q96FL9 552 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 IGHV3-66A0A0C4DH42 116 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 RS1O15537 224 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 GAS1P54826 345 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 NSUN5P1Q3KNT7 163 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 WNT10AQ9GZT5 417 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 SPANXB1Q9NS25 103 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 DOCK9Q9BZ29 2069 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 F6UB75 175 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 DKK1O94907 266 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 NDUFB4O95168 129 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 CLPSP04118 112 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 SAA1P0DJI8 122 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 RPS11P62280 158 aaKnown RBP eCLIP5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 MEF2BQ02080 365 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 CD69Q07108 199 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 AWAT1Q58HT5 328 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 C19orf54Q5BKX5 351 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF880Q6PDB4 577 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 PAQR4Q8N4S7 273 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 LYZL4Q96KX0 146 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 OTOGLQ3ZCN5 2332 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 IGHV3OR16-8A0A075B7F1 116 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 DPRXA6NFQ7 191 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF561-AS1K7EIQ3 104 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 K7EN84 100 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 TFF1P04155 84 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 AMY1AP04745 511 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 CD33P20138 364 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 ANOS1P23352 680 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 MORN2Q502X0 79 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 FAM53AQ6NSI3 398 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 LINC00305Q7Z4B0 112 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 MARVELD3Q96A59 401 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 NABP1Q96AH0 204 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 BPESC1Q9GZL8 116 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 MEGF9Q9H1U4 602 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 IGKV1-9A0A0C4DH69 117 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 SNURFLB1AK76 121 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 VENTXO95231 258 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 B3GALT5-AS1P59052 145 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 TMEM97Q5BJF2 176 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 CYP2G1PQ6ZSU1 146 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 OR10S1Q8NGN2 331 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 MYOZ3Q8TDC0 251 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 PRDM13Q9H4Q3 707 aa5.74□□□□□ -1.49
SRGAP1-206ENST00000543397 TRBV6-7A0A0A0MS04 114 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 G3V4G9 280 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 RPS20P60866 119 aaKnown RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 IBA57Q5T440 356 aaKnown RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 C1orf195Q5TG92 126 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 LAIR2Q6ISS4 152 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 BET1LQ9NYM9 111 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 MOB4Q9Y3A3 225 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 TECTAO75443 2155 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 FOXI3A8MTJ6 420 aaPredicted RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 IGFBP3P17936 291 aaPredicted RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 IER3P46695 156 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 RND3P61587 244 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 FAM74A4Q5TZK3 123 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF497Q6ZNH5 498 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 C9orf62Q8N4C0 152 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 TRAV24A0A0B4J272 114 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 H3BQ15 152 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 CRXO43186 299 aaPredicted RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 C1QL1O75973 258 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 ARL14EPLP0DKL9 152 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 RHOGP84095 191 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 SCGB1D4Q6XE38 83 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 BRD3OSQ6XYD6 125 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 GOLT1AQ6ZVE7 132 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 VMO1Q7Z5L0 202 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF525Q8N782 197 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 C3orf56Q8N813 242 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 LINC01356Q8N9X3 169 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 VAMP8Q9BV40 100 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 FNDC4Q9H6D8 234 aaPredicted RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 RNF223E7ERA6 249 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms