RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 TMEM158Q8WZ71 300 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 ARPC1AQ92747 370 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 MISP3Q96FF7 219 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 RCC1LQ96I51 464 aaKnown RBP11.58□□□□□ -0.56
DDX11-219ENST00000542242 FAM210AQ96ND0 272 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 RASL11BQ9BPW5 248 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 TREM1Q9NP99 234 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 CDC42EP3Q9UKI2 254 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.56
DDX11-219ENST00000542242 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
DDX11-219ENST00000542242 KRBOX1C9JBD0 128 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 CORTO00230 105 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 M6PRP20645 277 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 ZP3P21754 424 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 MFAP2P55001 183 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 CX3CL1P78423 397 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 MIC13Q5XKP0 118 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 FAM122CQ6P4D5 195 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 BPIFCQ8NFQ6 507 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 OR10G4Q8NGN3 311 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 OR10G9Q8NGN4 311 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 OR10G7Q8NGN6 311 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 MBD3L1Q8WWY6 194 aa11.57□□□□□ -0.56
DDX11-219ENST00000542242 ACTR3CQ9C0K3 210 aaPredicted RBP11.57□□□□□ -0.56
DDX11-219ENST00000542242 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
DDX11-219ENST00000542242 TRAV1-1A0A0B4J248 108 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 CTXND1A0A1B0GTU2 59 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 COL6A5A8TX70 2615 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 TSPAN9O75954 239 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 HLA-DRB1P01911 266 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 FBP1P09467 338 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 OR10J1P30954 320 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 ZNF726P1Q15940 193 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 LCN15Q6UWW0 184 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 ACY3Q96HD9 319 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 NARS2Q96I59 477 aaKnown RBP11.56□□□□□ -0.56
DDX11-219ENST00000542242 LINC00052Q96N35 136 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 SLC25A33Q9BSK2 321 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 FAM103A1Q9BTL3 118 aaKnown RBP11.56□□□□□ -0.56
DDX11-219ENST00000542242 TMEM231Q9H6L2 316 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 SLC39A9Q9NUM3 307 aa11.56□□□□□ -0.56
DDX11-219ENST00000542242 IGHV7-81A0A0B4J1V7 117 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 CYB5BO43169 146 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 YIF1AO95070 293 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 CTRB1P17538 263 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 RPL29P47914 159 aaKnown RBP11.55□□□□□ -0.56
DDX11-219ENST00000542242 B2MP61769 119 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 CCL20P78556 96 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 SRSF3P84103 164 aaKnown RBP11.55□□□□□ -0.56
DDX11-219ENST00000542242 NDPQ00604 133 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 GUK1Q16774 197 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 CTRB2Q6GPI1 263 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 IL17RELQ6ZVW7 336 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 SSX7Q7RTT5 188 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
DDX11-219ENST00000542242 OR1L6Q8NGR2 347 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 SSX3Q99909 188 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 PBDC1Q9BVG4 233 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 SLC45A2Q9UMX9 530 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
DDX11-219ENST00000542242 SOX21Q9Y651 276 aaPredicted RBP11.55□□□□□ -0.56
DDX11-219ENST00000542242 CRYGCP07315 174 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 DEFA4P12838 97 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 CDC34P49427 236 aaPredicted RBP11.54□□□□□ -0.56
DDX11-219ENST00000542242 RND2P52198 227 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 BPIFB3P59826 476 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 PEA15Q15121 130 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 STPG3Q8N7X2 389 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 PIFOQ8TCI5 191 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 C22orf15Q8WYQ4 148 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 NPIPB3Q92617 1050 aa11.54□□□□□ -0.56
DDX11-219ENST00000542242 RBM14Q96PK6 669 aaKnown RBP11.54□□□□□ -0.56
DDX11-219ENST00000542242 IGKV1OR2-108A0A075B7D4 117 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 NPIPB5A8MRT5 1133 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 SEC14L6B5MCN3 397 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 MT-CO2P00403 227 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 IGHV3-48P01763 117 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 CD5P06127 495 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 FGF8P55075 233 aaPredicted RBP11.53□□□□□ -0.56
DDX11-219ENST00000542242 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 CYP2G1PQ6ZSU1 146 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 TMEM219Q86XT9 240 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 C5orf56Q8N8D9 126 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 THAP8Q8NA92 274 aa11.53□□□□□ -0.56
DDX11-219ENST00000542242 EIF5A2Q9GZV4 153 aaKnown RBP11.53□□□□□ -0.56
DDX11-219ENST00000542242 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.57
DDX11-219ENST00000542242 A0A1W2PPV4 95 aa11.52□□□□□ -0.57
DDX11-219ENST00000542242 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
DDX11-219ENST00000542242 RBFOX3A6NFN3 312 aa11.52□□□□□ -0.57
DDX11-219ENST00000542242 H3BUX3 64 aa11.52□□□□□ -0.57
DDX11-219ENST00000542242 EIF3GO75821 320 aaKnown RBP eCLIP11.52□□□□□ -0.57
DDX11-219ENST00000542242 LINC00869P0C866 280 aa11.52□□□□□ -0.57
DDX11-219ENST00000542242 PRR20EP86478 221 aa11.52□□□□□ -0.57
DDX11-219ENST00000542242 PRR20CP86479 221 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms