RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	REG3G	Q6UW15	175 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	FBXW12	Q6X9E4	464 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	TMUB2	Q71RG4	321 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	OR5A2	Q8NGI9	324 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	OR5A1	Q8NGJ0	315 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	DEDD2	Q8WXF8	326 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	DDB2	Q92466	427 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	AURKB	Q96GD4	344 aa	Predicted RBP	4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	SPACA5	Q96QH8	159 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	LPAR5	Q9H1C0	372 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	ZNF696	Q9H7X3	374 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	HES4	Q9HCC6	221 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	GPR84	Q9NQS5	396 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	LYRM2	Q9NU23	88 aa	Predicted RBP	4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	NAT8B	Q9UHF3	227 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	MCTS1	Q9ULC4	181 aa	Known RBP	4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	TNFSF18	Q9UNG2	199 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	LAMTOR2	Q9Y2Q5	125 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	RFNG	Q9Y644	331 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	MYO7B	Q6PIF6	2116 aa		4.16	□□□□□ -1.74
DDB1-219	ENST00000541513	ARHGAP21	Q5T5U3	1957 aa		4.15	□□□□□ -1.74
DDB1-219	ENST00000541513	KIAA1549	Q9HCM3	1950 aa		4.15	□□□□□ -1.74
DDB1-219	ENST00000541513	FLNC	Q14315	2725 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	TRAV17	A0A0B4J275	112 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	IGHV1-69D	A0A0B4J2H0	117 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	RPL37AP8	A6NKH3	93 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	IFITM5	A6NNB3	132 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	KLLN	B2CW77	178 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	CLDN25	C9JDP6	229 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513		K7EM74	188 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	FFAR1	O14842	300 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	OR2A4	O95047	310 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	NRAS	P01111	189 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	CECR9	P0C854	216 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	ORM2	P19652	201 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	EVI2A	P22794	236 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	CRHBP	P24387	322 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	GABRA3	P34903	492 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	SLC25A1	P53007	311 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	DAD1	P61803	113 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	NCS1	P62166	190 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	RHOG	P84095	191 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	FABP9	Q0Z7S8	132 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	C1D	Q13901	141 aa	Known RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	SSX1	Q16384	188 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	FBXL19-AS1	Q494R0	122 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	ADAMTSL4-AS1	Q5T5F5	129 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	ZNF343	Q6P1L6	599 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	SCGB1D4	Q6XE38	83 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	C16orf47	Q6ZP98	133 aa	Predicted RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513		Q6ZS92	163 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	MSRB3	Q8IXL7	192 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	TCTE3	Q8IZS6	198 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	TCTEX1D1	Q8N7M0	179 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	OR52L1	Q8NGH7	329 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	OR5W2	Q8NH69	310 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	ZNF418	Q8TF45	676 aa	Predicted RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	TMEM190	Q8WZ59	177 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	ISOC1	Q96CN7	298 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	OR2A7	Q96R45	310 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	NDFIP1	Q9BT67	221 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	NKX6-2	Q9C056	277 aa	Predicted RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	SH3BGRL3	Q9H299	93 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	SCN3B	Q9NY72	215 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	RPS6KB2	Q9UBS0	482 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	PRND	Q9UKY0	176 aa		4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	SMG1	Q96Q15	3661 aa	Known RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	HELZ2	Q9BYK8	2649 aa	Known RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	FASN	P49327	2511 aa	Known RBP	4.15	□□□□□ -1.75
DDB1-219	ENST00000541513	INTS1	Q8N201	2190 aa	Known RBP	4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	PNMA8C	A0A1B0GUJ8	204 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	FXYD1	O00168	92 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	HMGN4	O00479	90 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	KCNK2	O95069	426 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	ADRA2A	P08913	450 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	OR4A8	P0C604	315 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	OR12D1	P0DN82	309 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	CCL3	P10147	92 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	EMP1	P54849	157 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	DSCR9	P59020	149 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	HIST1H1A	Q02539	215 aa	Predicted RBP	4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	FUT5	Q11128	374 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	NNAT	Q16517	81 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	PRR30	Q53SZ7	412 aa	Predicted RBP	4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	PRSS54	Q6PEW0	395 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	LINC00173	Q6ZV60	143 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	ARPIN	Q7Z6K5	226 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	MED12L	Q86YW9	2145 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	OR8I2	Q8N0Y5	310 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	LINC00337	Q8N6G1	96 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	OR4M1	Q8NGD0	313 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	OR51A2	Q8NGJ7	313 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	OR5D16	Q8NGK9	328 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	THEM6	Q8WUY1	208 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	DOCK7	Q96N67	2140 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	SDF2	Q99470	211 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	C1QTNF4	Q9BXJ3	329 aa		4.14	□□□□□ -1.75
DDB1-219	ENST00000541513	ZNF702P	Q9H963	129 aa		4.14	□□□□□ -1.75

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