RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PAFAH1B2P68402 229 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 KAAG1Q9UBP8 84 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 FCN1O00602 326 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 NDUFB3O43676 98 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 KIR2DS2P43631 304 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 CENPWQ5EE01 88 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 LYG1Q8N1E2 194 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 OR8I2Q8N0Y5 310 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 H1FXQ92522 213 aaKnown RBP13.89□□□□□ -0.19
SPIDR-227ENST00000541342 SPTBN1Q01082 2364 aaKnown RBP13.88□□□□□ -0.19
SPIDR-227ENST00000541342 TMEM8BA6NDV4 472 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 SNURFLB1AK76 121 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 GNLYP22749 145 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 G0S2P27469 103 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 RPEL1Q2QD12 228 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 ZNF714Q96N38 554 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 C20orf144Q9BQM9 153 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 SLC45A2Q9UMX9 530 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 CRYBB3P26998 211 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 Q0VG73 95 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 LRRC10Q5BKY1 277 aa13.88□□□□□ -0.19
SPIDR-227ENST00000541342 SLC25A48Q6ZT89 311 aaKnown RBP13.88□□□□□ -0.19
SPIDR-227ENST00000541342 RNASE7Q9H1E1 156 aaKnown RBP13.88□□□□□ -0.19
SPIDR-227ENST00000541342 MRPS11P82912 194 aaKnown RBP13.87□□□□□ -0.19
SPIDR-227ENST00000541342 PSG5Q15238 335 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 GAL3ST2Q9H3Q3 398 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 GNB4Q9HAV0 340 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 GGTLC3B5MD39 225 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 GATA2P23769 480 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-227ENST00000541342 Q8N976 141 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-227ENST00000541342 IGSF10Q6WRI0 2623 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 PPOXP50336 477 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 TMEM30BQ3MIR4 351 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 UHRF2Q96PU4 802 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 FBXL7Q9UJT9 491 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 TACC2O95359 2948 aa13.87□□□□□ -0.19
SPIDR-227ENST00000541342 OR10J4P0C629 311 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 PQLC2Q6ZP29 291 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 NABP2Q9BQ15 211 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 OR51B2Q9Y5P1 312 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 SPINK4O60575 86 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 IGLV2-8P01709 118 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 GNG4P50150 75 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 RANP62826 216 aaKnown RBP13.86□□□□□ -0.19
SPIDR-227ENST00000541342 ZNF705AQ6ZN79 300 aaPredicted RBP13.86□□□□□ -0.19
SPIDR-227ENST00000541342 BAGE3Q86Y29 109 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 BAGE2Q86Y30 109 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 OR5AU1Q8NGC0 362 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 VN1R17PQ8TDU5 208 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 ITLN2Q8WWU7 325 aaPredicted RBP13.86□□□□□ -0.19
SPIDR-227ENST00000541342 HINT2Q9BX68 163 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 GNB1LQ9BYB4 327 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 PAM16Q9Y3D7 125 aa13.86□□□□□ -0.19
SPIDR-227ENST00000541342 HELTA6NFD8 242 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 SRRM4A7MD48 611 aaKnown RBP13.85□□□□□ -0.19
SPIDR-227ENST00000541342 LY6HO94772 140 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 MT-CO2P00403 227 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 IGKV1-16P04430 117 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 FXYD3Q14802 87 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 DLX6P56179 175 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 CX3CL1P78423 397 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 C11orf71Q6IPW1 123 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 RCHY1Q96PM5 261 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 MIEN1Q9BRT3 115 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 ARL2-SNX15V9GYD0 113 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 A0A1W2PPR1 153 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 FNDC10F2Z333 226 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 SLC35B1P78383 322 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 RAB31Q13636 194 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 POU2AF1Q16633 256 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 MLANAQ16655 118 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 TMEM136Q6ZRR5 245 aa13.85□□□□□ -0.19
SPIDR-227ENST00000541342 A6NNC1 897 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 NAV3Q8IVL0 2385 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 TRBV9A0A0B4J1U6 114 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 GPX1P07203 203 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 CT45A6P0DMU7 189 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 CT45A5P0DMU8 189 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 CT45A7P0DMV0 189 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 KIAA1644Q3SXP7 199 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 IGF2BP2-AS1Q96M15 143 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 ENY2Q9NPA8 101 aa13.84□□□□□ -0.19
SPIDR-227ENST00000541342 ACACBO00763 2458 aa13.83□□□□□ -0.2
SPIDR-227ENST00000541342 PRCDQ00LT1 54 aa13.83□□□□□ -0.2
SPIDR-227ENST00000541342 ZNF841Q6ZN19 808 aa13.83□□□□□ -0.2
SPIDR-227ENST00000541342 J3QR06 171 aa13.83□□□□□ -0.2
SPIDR-227ENST00000541342 TMEM155Q4W5P6 130 aa13.83□□□□□ -0.2
SPIDR-227ENST00000541342 MORN5Q5VZ52 161 aa13.83□□□□□ -0.2
SPIDR-227ENST00000541342 TCL1AP56279 114 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 C11orf42Q8N5U0 333 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 OR9G1Q8NH87 305 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 TMEM167BQ9NRX6 74 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 NAT8BQ9UHF3 227 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 ZNF25P17030 456 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-227ENST00000541342 TMEM183BQ1AE95 376 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 ZNF833PQ6ZTB9 187 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 RALYQ9UKM9 306 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms