RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
UBE3B-211ENST00000539843 OR11H2Q8NH07 326 aa11.27□□□□□ -0.61
UBE3B-211ENST00000539843 OR52I2Q8NH67 350 aa11.27□□□□□ -0.61
UBE3B-211ENST00000539843 TERB2Q8NHR7 220 aa11.27□□□□□ -0.61
UBE3B-211ENST00000539843 TP53RKQ96S44 253 aa11.27□□□□□ -0.61
UBE3B-211ENST00000539843 C11orf68Q9H3H3 251 aaKnown RBP11.27□□□□□ -0.61
UBE3B-211ENST00000539843 CACFD1Q9UGQ2 172 aa11.27□□□□□ -0.61
UBE3B-211ENST00000539843 A0A0B4J293 547 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 DISC1C4P0D8 188 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 RGS5O15539 181 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 CLN5O75503 358 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 TMEM50AO95807 157 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 ETV6P41212 452 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 DEFB131AP59861 70 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 EWSR1Q01844 656 aaKnown RBP eCLIP11.26□□□□□ -0.61
UBE3B-211ENST00000539843 SSBP1Q04837 148 aaKnown RBP11.26□□□□□ -0.61
UBE3B-211ENST00000539843 IZUMO4Q1ZYL8 232 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 TMEM229BQ8NBD8 167 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 ALMS1Q8TCU4 4167 aa11.26□□□□□ -0.61
UBE3B-211ENST00000539843 IGHV3-66A0A0C4DH42 116 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 TEX13DA0A0J9YY54 714 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-211ENST00000539843 GABARAPO95166 117 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
UBE3B-211ENST00000539843 UCP1P25874 307 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 HTR2BP41595 481 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 RPL5P46777 297 aaKnown RBP11.25□□□□□ -0.61
UBE3B-211ENST00000539843 SPCS3P61009 180 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 ZNF124Q15973 351 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 STEAP1BQ6NZ63 245 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 NOXA1Q86UR1 476 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 OR13C8Q8NGS7 320 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 OR4X1Q8NH49 305 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 HEYLQ9NQ87 328 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-211ENST00000539843 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-211ENST00000539843 FBXL17Q9UF56 701 aa11.25□□□□□ -0.61
UBE3B-211ENST00000539843 HELTA6NFD8 242 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 GABARAPH6UMI1 98 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 TCTAP57738 103 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 DHODHQ02127 395 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 SURF2Q15527 256 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-211ENST00000539843 SP6Q3SY56 376 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 LEMD1Q68G75 181 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 ETFRF1Q6IPR1 90 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 OR52E5Q8NH55 327 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 ABHD1Q96SE0 405 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 RABL2AQ9UBK7 228 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-211ENST00000539843 RABL2BQ9UNT1 228 aa11.24□□□□□ -0.61
UBE3B-211ENST00000539843 BIRC6Q9NR09 4857 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 CD74P04233 296 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 P0C879 139 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 SPP1P10451 314 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 SLC25A4P12235 298 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 P2RY1P47900 373 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 AP2S1P53680 142 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-211ENST00000539843 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-211ENST00000539843 OR1S2Q8NGQ3 325 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 MARCH1Q8TCQ1 289 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 Q8WTZ3 238 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 RBPMSQ93062 196 aaKnown RBP11.23□□□□□ -0.61
UBE3B-211ENST00000539843 TMEM222Q9H0R3 208 aa11.23□□□□□ -0.61
UBE3B-211ENST00000539843 A0A1B0GU03 582 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 APOHP02749 345 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-211ENST00000539843 OR5AC1P0C628 307 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 CRYBB3P26998 211 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 GPR107Q5VW38 600 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 GPR141Q7Z602 305 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
UBE3B-211ENST00000539843 C2CD4CQ8TF44 421 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 SCGB3A2Q96PL1 93 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 PRRT1Q99946 306 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 NAA60Q9H7X0 242 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 PFDN2Q9UHV9 154 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 KCNIP3Q9Y2W7 256 aa11.22□□□□□ -0.61
UBE3B-211ENST00000539843 EPPK1P58107 5090 aaKnown RBP11.22□□□□□ -0.61
UBE3B-211ENST00000539843 PIGBOS1A0A0B4J2F0 54 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 C11orf94C9JXX5 98 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-211ENST00000539843 CDS2O95674 445 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 AKAIN1P0CW23 69 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 NANOS2P60321 138 aaKnown RBP11.21□□□□□ -0.61
UBE3B-211ENST00000539843 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
UBE3B-211ENST00000539843 CTF1Q16619 201 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 SLC24A4Q8NFF2 622 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 OR4D10Q8NGI6 311 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 CACNG5Q9UF02 275 aa11.21□□□□□ -0.61
UBE3B-211ENST00000539843 HNRNPCP07910 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBE3B-211ENST00000539843 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 OR10J1P30954 320 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 NUP62P37198 522 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-211ENST00000539843 SNRPD3P62318 126 aaKnown RBP11.2□□□□□ -0.62
UBE3B-211ENST00000539843 DHRS2Q13268 280 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 IL18Q14116 193 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 TIGITQ495A1 244 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 C2orf83Q53S99 150 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms