RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 IGKV3-7A0A075B6H7 116 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 TRAV2A0A0B4J234 112 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 A0A1W2PS18 150 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 GABARAPH6UMI1 98 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 DNASE2O00115 360 aaPredicted RBP9.69□□□□□ -0.86
RTN3-207ENST00000536011 RGS5O15539 181 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 CD74P04233 296 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 UCP1P25874 307 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 OPRK1P41145 380 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 RPL11P62913 178 aaKnown RBP9.69□□□□□ -0.86
RTN3-207ENST00000536011 IZUMO4Q1ZYL8 232 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 GPR107Q5VW38 600 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 FAM90A2PQ658T7 463 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 STEAP1BQ6NZ63 245 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 CEMP1Q6PRD7 247 aaPredicted RBP9.69□□□□□ -0.86
RTN3-207ENST00000536011 OR13C8Q8NGS7 320 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 VSIRQ9H7M9 311 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 CACFD1Q9UGQ2 172 aa9.69□□□□□ -0.86
RTN3-207ENST00000536011 PUS1Q9Y606 427 aaKnown RBP eCLIP9.69□□□□□ -0.86
RTN3-207ENST00000536011 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 RPS10-NUDT3A0A1W2PQS6 291 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
RTN3-207ENST00000536011 SURF2Q15527 256 aaPredicted RBP9.68□□□□□ -0.86
RTN3-207ENST00000536011 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 ST8SIA2Q92186 375 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 METTL26Q96S19 204 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 ABHD1Q96SE0 405 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 MFFQ9GZY8 342 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 RABL2AQ9UBK7 228 aaPredicted RBP9.68□□□□□ -0.86
RTN3-207ENST00000536011 RABL2BQ9UNT1 228 aa9.68□□□□□ -0.86
RTN3-207ENST00000536011 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 TEX13DA0A0J9YY54 714 aaPredicted RBP9.67□□□□□ -0.86
RTN3-207ENST00000536011 DISC1C4P0D8 188 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 CLN5O75503 358 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 TMEM50AO95807 157 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 LY6G6CO95867 125 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 RNASE2P10153 161 aaKnown RBP9.67□□□□□ -0.86
RTN3-207ENST00000536011 NPPCP23582 126 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 ETV6P41212 452 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 HTR2BP41595 481 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 EIF2B2P49770 351 aaKnown RBP9.67□□□□□ -0.86
RTN3-207ENST00000536011 SPCS3P61009 180 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 SP6Q3SY56 376 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 GPR141Q7Z602 305 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 OR4X1Q8NH49 305 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 MARCH1Q8TCQ1 289 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 GRAMD2BQ96HH9 432 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 ZNF414Q96IQ9 312 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 RARRES2Q99969 163 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
RTN3-207ENST00000536011 NAA50Q9GZZ1 169 aaKnown RBP9.67□□□□□ -0.86
RTN3-207ENST00000536011 TMEM222Q9H0R3 208 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 MS4A6AQ9H2W1 248 aa9.67□□□□□ -0.86
RTN3-207ENST00000536011 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.67□□□□□ -0.86
RTN3-207ENST00000536011 CA1P00915 261 aaPredicted RBP9.66□□□□□ -0.86
RTN3-207ENST00000536011 SMIM18P0DKX4 95 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 DHODHQ02127 395 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 AARDQ4LEZ3 155 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 OR4D10Q8NGI6 311 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 SMIM4Q8WVI0 70 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 RBPMSQ93062 196 aaKnown RBP9.66□□□□□ -0.86
RTN3-207ENST00000536011 TMEM230Q96A57 120 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 PRRT1Q99946 306 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 C11orf68Q9H3H3 251 aaKnown RBP9.66□□□□□ -0.86
RTN3-207ENST00000536011 NAA60Q9H7X0 242 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 HEYLQ9NQ87 328 aaPredicted RBP9.66□□□□□ -0.86
RTN3-207ENST00000536011 RABAC1Q9UI14 185 aa9.66□□□□□ -0.86
RTN3-207ENST00000536011 CDS2O95674 445 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 OR5AC1P0C628 307 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 AKAIN1P0CW23 69 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 SLC25A4P12235 298 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
RTN3-207ENST00000536011 ZNF124Q15973 351 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 NOXA1Q86UR1 476 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 STHQ8IWL8 128 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 OR11H2Q8NH07 326 aa9.65□□□□□ -0.86
RTN3-207ENST00000536011 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 A0A1B0GU03 582 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
RTN3-207ENST00000536011 CRYBB3P26998 211 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 DEFB131AP59861 70 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 TMEM187Q14656 261 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 STXBP6Q8NFX7 210 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
RTN3-207ENST00000536011 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
RTN3-207ENST00000536011 SCGB3A2Q96PL1 93 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 CACNG5Q9UF02 275 aa9.64□□□□□ -0.87
RTN3-207ENST00000536011 PIGBOS1A0A0B4J2F0 54 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 HELTA6NFD8 242 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 CRYM-AS1A6NIL9 109 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms