RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 BSXQ3C1V8 233 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 SPINK9Q5DT21 86 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 TOMM20LQ6UXN7 152 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
CAPN1-228ENST00000534373 DYNC2LI1Q8TCX1 351 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 RBPMSQ93062 196 aaKnown RBP9.93□□□□□ -0.82
CAPN1-228ENST00000534373 PRRT1Q99946 306 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 NAA60Q9H7X0 242 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 GPR132Q9UNW8 380 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 GSTZ1O43708 216 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-228ENST00000534373 IGHV3-48P01763 117 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 OR5AC1P0C628 307 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 HTR2BP41595 481 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 HOXA1P49639 335 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-228ENST00000534373 TNFRSF9Q07011 255 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 IL18Q14116 193 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 OR4X1Q8NH49 305 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 SCGB3A2Q96PL1 93 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 TMEM231Q9H6L2 316 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 VSIRQ9H7M9 311 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 MAP6D1Q9H9H5 199 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 RSL24D1Q9UHA3 163 aaKnown RBP9.92□□□□□ -0.82
CAPN1-228ENST00000534373 KCNIP3Q9Y2W7 256 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 PUS1Q9Y606 427 aaKnown RBP eCLIP9.92□□□□□ -0.82
CAPN1-228ENST00000534373 DNAH1Q9P2D7 4330 aa9.92□□□□□ -0.82
CAPN1-228ENST00000534373 TRAV30A0A087WSZ9 112 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 TRAV2A0A0B4J234 112 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 A0A0G2JRQ6 117 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 A0A1W2PS18 150 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 ANKRD20A5PA0PJZ0 165 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 CRYM-AS1A6NIL9 109 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 CLN5O75503 358 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 OPRK1P41145 380 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 Q6ZRM9 215 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 SELENOHQ8IZQ5 122 aaKnown RBP9.91□□□□□ -0.82
CAPN1-228ENST00000534373 OR4C16Q8NGL9 310 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 RNF183Q96D59 192 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 ZFAND3Q9H8U3 227 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 SCP2D1Q9UJQ7 156 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 TMEM56-RWDD3S4R434 201 aa9.91□□□□□ -0.82
CAPN1-228ENST00000534373 RPS10-NUDT3A0A1W2PQS6 291 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 DFFBO76075 338 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 NPPCP23582 126 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 FAAP20Q6NZ36 180 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 TCF24Q7RTU0 167 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 IL22RA2Q969J5 263 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 SOSTQ9BQB4 213 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 CSTL1Q9H114 145 aa9.9□□□□□ -0.82
CAPN1-228ENST00000534373 FNDC4Q9H6D8 234 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-228ENST00000534373 IGHV3-49A0A0A0MS15 119 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 PIGBOS1A0A0B4J2F0 54 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 A0A1B0GU03 582 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 DEFB135Q30KP9 77 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 C2orf83Q53S99 150 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 TMEM268Q5VZI3 342 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 LYG2Q86SG7 212 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 NOXA1Q86UR1 476 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 APRG1Q8IVJ8 170 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 TMEM217Q8N7C4 229 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 OR51S1Q8NGJ8 323 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 LHFPL5Q8TAF8 219 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 RNASEH2CQ8TDP1 164 aaKnown RBP9.89□□□□□ -0.83
CAPN1-228ENST00000534373 ST8SIA2Q92186 375 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 GPR146Q96CH1 333 aa9.89□□□□□ -0.83
CAPN1-228ENST00000534373 SLIRPQ9GZT3 109 aaKnown RBP9.89□□□□□ -0.83
CAPN1-228ENST00000534373 HEYLQ9NQ87 328 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-228ENST00000534373 IGHV3OR16-13A0A075B7E8 117 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 IGHV3-74A0A0B4J1X5 117 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 A0A0J9YWU9 116 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 FABP12A6NFH5 140 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 MPTX1A8MV57 137 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 DNASE2O00115 360 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-228ENST00000534373 SLC25A4P12235 298 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 RPL35AP18077 110 aaKnown RBP9.88□□□□□ -0.83
CAPN1-228ENST00000534373 CRYBB3P26998 211 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 TFPI2P48307 235 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 MLANAQ16655 118 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 ETFRF1Q6IPR1 90 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 LILRB2Q8N423 598 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 GATAD1Q8WUU5 269 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 TMEM230Q96A57 120 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 METTL26Q96S19 204 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 MS4A6AQ9H2W1 248 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 CACNG5Q9UF02 275 aa9.88□□□□□ -0.83
CAPN1-228ENST00000534373 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 IGKV1-17P01599 117 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 APOHP02749 345 aaPredicted RBP9.87□□□□□ -0.83
CAPN1-228ENST00000534373 TNFSF8P32971 234 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 TMEM187Q14656 261 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 NMSQ5H8A3 153 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 GBGT1Q8N5D6 347 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 MCFD2Q8NI22 146 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 Q8WTZ3 238 aa9.87□□□□□ -0.83
CAPN1-228ENST00000534373 NARS2Q96I59 477 aaKnown RBP9.87□□□□□ -0.83
CAPN1-228ENST00000534373 RBM38Q9H0Z9 239 aaKnown RBP9.87□□□□□ -0.83
CAPN1-228ENST00000534373 MRPL36Q9P0J6 103 aaKnown RBP9.87□□□□□ -0.83
CAPN1-228ENST00000534373 NUPR2A6NF83 97 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 CEBPZOSA8MTT3 80 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 SULT1A3P0DMM9 295 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 SULT1A4P0DMN0 295 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms