RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 DEXIO95424 95 aa0.18□□□□□ -2.38
ATM-220ENST00000533526 CNBPP62633 177 aaKnown RBP0.18□□□□□ -2.38
ATM-220ENST00000533526 RNASE10Q5GAN6 216 aaKnown RBP0.18□□□□□ -2.38
ATM-220ENST00000533526 LPCAT4Q643R3 524 aa0.18□□□□□ -2.38
ATM-220ENST00000533526 TOMM6Q96B49 74 aa0.18□□□□□ -2.38
ATM-220ENST00000533526 OR52E6Q96RD3 313 aa0.18□□□□□ -2.38
ATM-220ENST00000533526 XPNPEP1Q9NQW7 623 aa0.18□□□□□ -2.38
ATM-220ENST00000533526 CDC42SE1Q9NRR8 79 aa0.18□□□□□ -2.38
ATM-220ENST00000533526 MAP3K5Q99683 1374 aa0.18□□□□□ -2.38
ATM-220ENST00000533526 TNRC6AQ8NDV7 1962 aaKnown RBP0.17□□□□□ -2.38
ATM-220ENST00000533526 TRAV9-1A0A075B6T8 112 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 HLA-DRB1P01911 266 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 MGST1P10620 155 aaKnown RBP0.17□□□□□ -2.38
ATM-220ENST00000533526 CD79AP11912 226 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 ZNF25P17030 456 aaPredicted RBP0.17□□□□□ -2.38
ATM-220ENST00000533526 HIST3H3Q16695 136 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 TRAPPC6BQ86SZ2 158 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 C20orf196Q8IYI0 205 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 C3orf56Q8N813 242 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 OR51D1Q8NGF3 324 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 TEX47Q8TBZ9 253 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 H1FXQ92522 213 aaKnown RBP0.17□□□□□ -2.38
ATM-220ENST00000533526 KLK6Q92876 244 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 SLC35B4Q969S0 331 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 GPR146Q96CH1 333 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 NIPSNAP1Q9BPW8 284 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 TP73-AS1Q9UF72 201 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 SLC35A3Q9Y2D2 325 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 TMEM56-RWDD3S4R434 201 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 MCM3APO60318 1980 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 NUP155O75694 1391 aa0.17□□□□□ -2.38
ATM-220ENST00000533526 ZFC3H1O60293 1989 aaKnown RBP0.16□□□□□ -2.38
ATM-220ENST00000533526 EXOC1LA0A1B0GW35 172 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 CCDC160A6NGH7 325 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 FAAHO00519 579 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 PRH1P02810 166 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 TCL1AP56279 114 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 PSME3P61289 254 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 SNRPD2P62316 118 aaKnown RBP0.16□□□□□ -2.38
ATM-220ENST00000533526 HIST2H3PS2Q5TEC6 136 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 TEX261Q6UWH6 196 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 ALKAL1Q6UXT8 129 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 GKN2Q86XP6 184 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 SMR3AQ99954 134 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 C11orf68Q9H3H3 251 aaKnown RBP0.16□□□□□ -2.38
ATM-220ENST00000533526 NKIRAS1Q9NYS0 192 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 U3KQ87 197 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 HECW1Q76N89 1606 aa0.16□□□□□ -2.38
ATM-220ENST00000533526 BUB1B-PAK6H3BSN5 160 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 HIST1H1TP22492 207 aaPredicted RBP0.15□□□□□ -2.39
ATM-220ENST00000533526 EFNA4P52798 201 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 CDC42P60953 191 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 YPEL3P61236 119 aaPredicted RBP0.15□□□□□ -2.39
ATM-220ENST00000533526 MAGOHP61326 146 aaKnown RBP0.15□□□□□ -2.39
ATM-220ENST00000533526 PSG9Q00887 426 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 FAM74A1Q5RGS3 127 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 OR13D1Q8NGV5 346 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 CFAP53Q96M91 514 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 MRPS26Q9BYN8 205 aaKnown RBP0.15□□□□□ -2.39
ATM-220ENST00000533526 NIT2Q9NQR4 276 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 OSTCQ9NRP0 149 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 CMTM6Q9NX76 183 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 FRAS1Q86XX4 4008 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 CEP192Q8TEP8 1941 aa0.15□□□□□ -2.39
ATM-220ENST00000533526 MYO3BQ8WXR4 1341 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 PLXNA4Q9HCM2 1894 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 GPR98Q8WXG9 6306 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 C7orf71A4D174 169 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 CALB1P05937 261 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 S100A4P26447 101 aaKnown RBP0.14□□□□□ -2.39
ATM-220ENST00000533526 SPOPLQ6IQ16 392 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 LINC00575Q6W349 94 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 LINC00322Q6ZN03 302 aaPredicted RBP0.14□□□□□ -2.39
ATM-220ENST00000533526 LCA10Q71F78 164 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 ANKRD29Q8N6D5 301 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 LINC00301Q8NCQ3 95 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 PLPP5Q8NEB5 264 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 TSPAN32Q96QS1 320 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 C20orf27Q9GZN8 174 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 C14orf132Q9NPU4 83 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 EPDR1Q9UM22 224 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 SBF1O95248 1867 aa0.14□□□□□ -2.39
ATM-220ENST00000533526 LINC00854A0A1B0GVQ3 168 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 CRYZL1O95825 349 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 DNAL4O96015 105 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 RPL5P46777 297 aaKnown RBP0.13□□□□□ -2.39
ATM-220ENST00000533526 SPCS3P61009 180 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 OR2F1Q13607 317 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 DEFB113Q30KQ7 82 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 SPRNQ5BIV9 151 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 TMEM86BQ8N661 226 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 PTH2Q96A98 100 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 OR51V1Q9H2C8 321 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 TMEM14CQ9P0S9 112 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 ATP6V1DQ9Y5K8 247 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 V9GYY5 206 aaPredicted RBP0.13□□□□□ -2.39
ATM-220ENST00000533526 SNAPC4Q5SXM2 1469 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 NEO1Q92859 1461 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 MYH7BA7E2Y1 1941 aa0.13□□□□□ -2.39
ATM-220ENST00000533526 ZNF106Q9H2Y7 1883 aaKnown RBP0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms