RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 IL34Q6ZMJ4 242 aa18.94■□□□□ 0.62
USP48-214ENST00000532737 GPHB5Q86YW7 130 aa18.94■□□□□ 0.62
USP48-214ENST00000532737 RNASEH2CQ8TDP1 164 aaKnown RBP18.94■□□□□ 0.62
USP48-214ENST00000532737 IGHV3-35A0A0C4DH35 117 aa18.93■□□□□ 0.62
USP48-214ENST00000532737 CTSGP08311 255 aa18.93■□□□□ 0.62
USP48-214ENST00000532737 DCTN2Q13561 401 aaKnown RBP18.93■□□□□ 0.62
USP48-214ENST00000532737 NOXA1Q86UR1 476 aa18.93■□□□□ 0.62
USP48-214ENST00000532737 CIB3Q96Q77 187 aaPredicted RBP18.93■□□□□ 0.62
USP48-214ENST00000532737 GAR1Q9NY12 217 aaKnown RBP18.93■□□□□ 0.62
USP48-214ENST00000532737 C5orf51A6NDU8 294 aa18.92■□□□□ 0.62
USP48-214ENST00000532737 C15orf62A8K5M9 175 aa18.92■□□□□ 0.62
USP48-214ENST00000532737 SAP30O75446 220 aa18.92■□□□□ 0.62
USP48-214ENST00000532737 SCGB1D2O95969 90 aa18.92■□□□□ 0.62
USP48-214ENST00000532737 ATP5IP56385 69 aaPredicted RBP18.92■□□□□ 0.62
USP48-214ENST00000532737 SPSB3Q6PJ21 355 aa18.92■□□□□ 0.62
USP48-214ENST00000532737 ELOVL1Q9BW60 279 aa18.92■□□□□ 0.62
USP48-214ENST00000532737 FAM106AQ4KMX7 169 aa18.91■□□□□ 0.62
USP48-214ENST00000532737 ZNF414Q96IQ9 312 aa18.91■□□□□ 0.62
USP48-214ENST00000532737 C2orf50Q96LR7 162 aa18.91■□□□□ 0.62
USP48-214ENST00000532737 OR4C12Q96R67 309 aa18.91■□□□□ 0.62
USP48-214ENST00000532737 RPS10-NUDT3A0A1W2PQS6 291 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 LGALS9O00182 355 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 GNG7O60262 68 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 TMEM50AO95807 157 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 MBPP02686 304 aaPredicted RBP18.9■□□□□ 0.62
USP48-214ENST00000532737 IFNA4P05014 189 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 CSN3P07498 182 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 NPBWR1P48145 328 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 KRTAP10-11P60412 298 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 UNQ9165/PRO28630Q6UXU0 137 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 GSG1LQ6UXU4 331 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 REC114Q7Z4M0 266 aa18.9■□□□□ 0.62
USP48-214ENST00000532737 ZNF320A2RRD8 509 aa18.89■□□□□ 0.61
USP48-214ENST00000532737 NUPL2O15504 423 aaKnown RBP18.89■□□□□ 0.61
USP48-214ENST00000532737 SSSCA1O60232 199 aa18.89■□□□□ 0.61
USP48-214ENST00000532737 INSL3P51460 131 aa18.89■□□□□ 0.61
USP48-214ENST00000532737 EGFEM1PQ0D2K5 195 aa18.89■□□□□ 0.61
USP48-214ENST00000532737 PRSS54Q6PEW0 395 aa18.89■□□□□ 0.61
USP48-214ENST00000532737 OR4X1Q8NH49 305 aa18.89■□□□□ 0.61
USP48-214ENST00000532737 ZNF436Q9C0F3 470 aaPredicted RBP18.89■□□□□ 0.61
USP48-214ENST00000532737 PEMTQ9UBM1 199 aa18.89■□□□□ 0.61
USP48-214ENST00000532737 C7orf66A4D0T2 115 aa18.88■□□□□ 0.61
USP48-214ENST00000532737 H3BP45 60 aa18.88■□□□□ 0.61
USP48-214ENST00000532737 LY86O95711 162 aa18.88■□□□□ 0.61
USP48-214ENST00000532737 PAX9P55771 341 aa18.88■□□□□ 0.61
USP48-214ENST00000532737 IL15RAQ13261 267 aa18.88■□□□□ 0.61
USP48-214ENST00000532737 SPANXN5Q5MJ07 72 aa18.88■□□□□ 0.61
USP48-214ENST00000532737 ADAMTSL5Q6ZMM2 481 aa18.88■□□□□ 0.61
USP48-214ENST00000532737 PAIP2BQ9ULR5 123 aaKnown RBP18.88■□□□□ 0.61
USP48-214ENST00000532737 RCL1Q9Y2P8 373 aaKnown RBP18.88■□□□□ 0.61
USP48-214ENST00000532737 GOSR2O14653 212 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 CLN5O75503 358 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 SIX6O95475 246 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 PRB2P02812 416 aaPredicted RBP18.87■□□□□ 0.61
USP48-214ENST00000532737 SLC25A4P12235 298 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 EDN2P20800 178 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 RAB11AP62491 216 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 CD69Q07108 199 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 HAPLN4Q86UW8 402 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 SMIM8Q96KF7 97 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 PSENENQ9NZ42 101 aa18.87■□□□□ 0.61
USP48-214ENST00000532737 RND2P52198 227 aa18.86■□□□□ 0.61
USP48-214ENST00000532737 RPP30P78346 268 aaKnown RBP18.86■□□□□ 0.61
USP48-214ENST00000532737 RGS21Q2M5E4 152 aa18.86■□□□□ 0.61
USP48-214ENST00000532737 ETFRF1Q6IPR1 90 aa18.86■□□□□ 0.61
USP48-214ENST00000532737 SLC16A13Q7RTY0 426 aa18.86■□□□□ 0.61
USP48-214ENST00000532737 TMEM190Q8WZ59 177 aa18.86■□□□□ 0.61
USP48-214ENST00000532737 RAB40CQ96S21 281 aa18.86■□□□□ 0.61
USP48-214ENST00000532737 SIGLEC8Q9NYZ4 499 aa18.86■□□□□ 0.61
USP48-214ENST00000532737 STRAPQ9Y3F4 350 aaKnown RBP18.86■□□□□ 0.61
USP48-214ENST00000532737 TMEM213A2RRL7 107 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 C2orf70A6NJV1 201 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 A8MWP6 167 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 NDUFA4O00483 81 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 SSNA1O43805 119 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 TM4SF20Q53R12 229 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 TMEM116Q8NCL8 245 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 ALG5Q9Y673 324 aa18.85■□□□□ 0.61
USP48-214ENST00000532737 K7EPK0 472 aa18.84■□□□□ 0.61
USP48-214ENST00000532737 GPX4P36969 197 aaPredicted RBP18.84■□□□□ 0.61
USP48-214ENST00000532737 RELQ04864 619 aaPredicted RBP18.84■□□□□ 0.61
USP48-214ENST00000532737 NPIPB3Q92617 1050 aa18.84■□□□□ 0.61
USP48-214ENST00000532737 ACY3Q96HD9 319 aa18.84■□□□□ 0.61
USP48-214ENST00000532737 LSM5Q9Y4Y9 91 aaKnown RBP18.84■□□□□ 0.61
USP48-214ENST00000532737 IGHV3OR16-8A0A075B7F1 116 aa18.83■□□□□ 0.6
USP48-214ENST00000532737 IGLV1-51P01701 117 aa18.83■□□□□ 0.6
USP48-214ENST00000532737 FOLR2P14207 255 aa18.83■□□□□ 0.6
USP48-214ENST00000532737 TAS2R30P59541 319 aa18.83■□□□□ 0.6
USP48-214ENST00000532737 CACNG8Q8WXS5 425 aa18.83■□□□□ 0.6
USP48-214ENST00000532737 C20orf24Q9BUV8 137 aa18.83■□□□□ 0.6
USP48-214ENST00000532737 UFC1Q9Y3C8 167 aa18.83■□□□□ 0.6
USP48-214ENST00000532737 PRSS46E5RG02 174 aa18.82■□□□□ 0.6
USP48-214ENST00000532737 IGKV1-17P01599 117 aa18.82■□□□□ 0.6
USP48-214ENST00000532737 IGLC1P0CG04 106 aa18.82■□□□□ 0.6
USP48-214ENST00000532737 CBLN1P23435 193 aa18.82■□□□□ 0.6
USP48-214ENST00000532737 TIGITQ495A1 244 aa18.82■□□□□ 0.6
USP48-214ENST00000532737 C11orf1Q9H5F2 150 aa18.82■□□□□ 0.6
USP48-214ENST00000532737 TSC22D2O75157 780 aa18.81■□□□□ 0.6
USP48-214ENST00000532737 YIF1AO95070 293 aa18.81■□□□□ 0.6
USP48-214ENST00000532737 ELLP55199 621 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms