RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 IGHV3-11P01762 117 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 LYNX1P0DP58 116 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 ZIC4Q8N9L1 334 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 FGFBP3Q8TAT2 258 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 C18orf15Q96N68 181 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 SMDT1Q9H4I9 107 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-232ENST00000532649 GPR179Q6PRD1 2367 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 KBTBD11-OT1A0A1B0GTJ5 212 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 FAM90A26D6RGX4 464 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 THBDP07204 575 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 FOXG1P55316 489 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-232ENST00000532649 FMC1Q96HJ9 113 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 DSCR9P59020 149 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 CYB5R2Q6BCY4 276 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 FAM90A1Q86YD7 464 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 CYB561D1Q8N8Q1 229 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 NPIPB3Q92617 1050 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 DERL1Q9BUN8 251 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 CXorf65A6NEN9 183 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 ZNF600Q6ZNG1 722 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 TAF15Q92804 592 aaKnown RBP eCLIP7.31□□□□□ -1.243e-8■■■□□ 14.9
CTNND1-232ENST00000532649 SLC25A28Q96A46 364 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 S4R3C0 116 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 A0A087WX48 190 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 ZNF98A6NK75 572 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 IGHV3-48P01763 117 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 DDTP30046 118 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 GPX4P36969 197 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-232ENST00000532649 TMEM187Q14656 261 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 C3orf56Q8N813 242 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 PLSCR4Q9NRQ2 329 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 C21orf62Q9NYP8 219 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 A0A0G2JK05 382 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 HIST1H2BAQ96A08 127 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 LYZL4Q96KX0 146 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 FBXL15Q9H469 300 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 LINC00312Q9Y6C7 94 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-232ENST00000532649 IL18BPO95998 194 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 CD28P10747 220 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 PRB3Q04118 309 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-232ENST00000532649 NABP2Q9BQ15 211 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 CCL3L1P16619 93 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 ATP5IP56385 69 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-232ENST00000532649 PLXNA4Q9HCM2 1894 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 MDKP21741 143 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-232ENST00000532649 MS4A6AQ9H2W1 248 aa7.3□□□□□ -1.24
CTNND1-232ENST00000532649 FRMPD3Q5JV73 1810 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 APOMO95445 188 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 CGB3P0DN86 165 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 FHITP49789 147 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 ZNF362Q5T0B9 420 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-232ENST00000532649 LAMTOR3Q9UHA4 124 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 COL6A6A6NMZ7 2263 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 TRAV8-2A0A0B4J237 113 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 A0A0G2JNJ9 132 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 VWC2LB2RUY7 222 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 INS-IGF2F8WCM5 200 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 TMEM50AO95807 157 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 INSP01308 110 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 GLMPQ8WWB7 406 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 Q9UFV3 132 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 INTS1Q8N201 2190 aaKnown RBP7.29□□□□□ -1.24
CTNND1-232ENST00000532649 TFF1P04155 84 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 Q6ZS92 163 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 SDHCQ99643 169 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-232ENST00000532649 KLHDC3Q9BQ90 382 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 MED12Q93074 2177 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 HSPB1P04792 205 aaKnown RBP7.29□□□□□ -1.24
CTNND1-232ENST00000532649 CXCL2P19875 107 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 MEF2BQ02080 365 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-232ENST00000532649 A0A1B0GW15 77 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 SLC17A3O00476 420 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 LDLRAD4O15165 306 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 IGFBP3P17936 291 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-232ENST00000532649 SRSF7Q16629 238 aaKnown RBP eCLIP7.29□□□□□ -1.241e-6■■□□□ 13.9
CTNND1-232ENST00000532649 OSR1Q8TAX0 266 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-232ENST00000532649 PLPPR1Q8TBJ4 325 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 CLDN16Q9Y5I7 305 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 NLRC5Q86WI3 1866 aa7.29□□□□□ -1.24
CTNND1-232ENST00000532649 IGHV1-46P01743 117 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 APOHP02749 345 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-232ENST00000532649 TMEM249Q2WGJ8 235 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 FER1L6-AS1Q8NA97 138 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-232ENST00000532649 CACNA1BQ00975 2339 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 A0A087WV48 116 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 HBDP02042 147 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 GAS1P54826 345 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 KIF26BQ2KJY2 2108 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 C11orf44Q8N8P7 122 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 SSBP4Q9BWG4 385 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-232ENST00000532649 DMRTA1Q5VZB9 504 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 ST6GALNAC3Q8NDV1 305 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 ZNF319Q9P2F9 582 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 PLA2G2CQ5R387 149 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 MUC21Q5SSG8 566 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms