RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 ARFRP1Q13795 201 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 GRK1Q15835 563 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RNASE10Q5GAN6 216 aaKnown RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 ATAD3CQ5T2N8 411 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 FAM53AQ6NSI3 398 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 ZNF497Q6ZNH5 498 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 IDO2Q6ZQW0 420 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 TGIF2LYQ8IUE0 185 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 CD177Q8N6Q3 437 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 TERB2Q8NHR7 220 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 MRPL30Q8TCC3 161 aaKnown RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 ITLN1Q8WWA0 313 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 MAFIPQ8WZ33 124 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 TMEM56Q96MV1 263 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 PRRT1Q99946 306 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RNF126Q9BV68 326 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 ARL6Q9H0F7 186 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 C12orf4Q9NQ89 552 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 ZNF222Q9UK12 451 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 USF3Q68DE3 2245 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 CELSR1Q9NYQ6 3014 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 FAM208BQ5VWN6 2430 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 USP9YO00507 2555 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 IGKV1D-17A0A075B6S4 117 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 IGKV1-6A0A0C4DH72 117 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 A0A0G2JRQ6 117 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 A0A1W2PPR1 153 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 OR5H14A6NHG9 310 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 SNRPGP15A8MWD9 76 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 MCRIP1C9JLW8 97 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 C19orf84I3L1E1 186 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 DEGS1O15121 323 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 PFDN1O60925 122 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 HAND1O96004 215 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 DHFRP00374 187 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 PRB1P04280 392 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 CSN2P05814 226 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 OR4E1P0C645 316 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 PSG2P11465 335 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 GPR6P46095 362 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 AP2S1P53680 142 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RAB25P57735 213 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 TAS2R46P59540 309 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RRAS2P62070 204 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RPL18AQ02543 176 aaKnown RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 AESQ08117 197 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 HERPUD1Q15011 391 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 CDK10Q15131 360 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 POU2AF1Q16633 256 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RSBN1Q5VWQ0 802 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 TEX36Q5VZQ5 186 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 SLC25A42Q86VD7 318 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 ZCCHC24Q8N2G6 241 aaKnown RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 ZDHHC22Q8N966 263 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 OR11H7Q8NGC8 314 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RDH5Q92781 318 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 TMEM230Q96A57 120 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RASL11BQ9BPW5 248 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 DHRS9Q9BPW9 319 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 GINS4Q9BRT9 223 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 RTBDNQ9BSG5 229 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-214ENST00000530727 OPN4Q9UHM6 478 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 SCP2D1Q9UJQ7 156 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 VSIG4Q9Y279 399 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 OR51B2Q9Y5P1 312 aa3.18□□□□□ -1.9
PTPRC-214ENST00000530727 SVEP1Q4LDE5 3571 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 HELZ2Q9BYK8 2649 aaKnown RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 RFPL4AA6NLU0 287 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 DISC1C4P0D8 188 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 RFPL4AL1F8VTS6 287 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 M0R233 179 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 SDCBPO00560 298 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 CRXO43186 299 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 TFF1P04155 84 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 SCTP09683 121 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 SULT1A3P0DMM9 295 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 SULT1A4P0DMN0 295 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 OR5H8P0DN80 308 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 RCC1P18754 421 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 CXCL3P19876 107 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 ZBTB25P24278 435 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 MDH2P40926 338 aaKnown RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 GLP1RP43220 463 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 RND2P52198 227 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 SUPT4H1P63272 117 aaKnown RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 TNFAIP6P98066 277 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 CLINT1Q14677 625 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 FCN2Q15485 313 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 SURF2Q15527 256 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 SMIM21Q3B7S5 101 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 CHRFAM7AQ494W8 412 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 KLF17Q5JT82 389 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 C11orf71Q6IPW1 123 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 UFSP1Q6NVU6 142 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 REG3GQ6UW15 175 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 MRPL55Q7Z7F7 128 aaKnown RBP3.17□□□□□ -1.9
PTPRC-214ENST00000530727 STPG2Q8N412 459 aa3.17□□□□□ -1.9
PTPRC-214ENST00000530727 OR5H2Q8NGV7 314 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms