RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 C6orf201Q7Z4U5 140 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 DPPA2Q7Z7J5 298 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 PPP1R27Q86WC6 154 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TGIF2LYQ8IUE0 185 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TMEM183AQ8IXX5 376 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 BOD1L2Q8IYS8 172 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TMEM252Q8N6L7 170 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 CYB561D1Q8N8Q1 229 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 CCDC71LQ8N9Z2 235 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 LINC01006Q8NI28 216 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 IL22RA2Q969J5 263 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 S100PBPQ96BU1 408 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 FAM210BQ96KR6 192 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TMEM56Q96MV1 263 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 GPER1Q99527 375 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 P2RX4Q99571 388 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 SPIN2AQ99865 258 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 SPIN2BQ9BPZ2 258 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 AGMATQ9BSE5 352 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 HDHD3Q9BSH5 251 aaPredicted RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 EMC6Q9BV81 110 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 PARD6GQ9BYG4 376 aaPredicted RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 METTL9Q9H1A3 318 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 SLC2A9Q9NRM0 540 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 LYRM2Q9NU23 88 aaPredicted RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 PLEKHJ1Q9NW61 149 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 AK3Q9UIJ7 227 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 VAX2Q9UIW0 290 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TMEM56-RWDD3S4R434 201 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 PDE4DIPQ5VU43 2346 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 DOCK8Q8NF50 2099 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 IGHV5-51A0A0C4DH38 117 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 C3orf85A0A1B0GTC6 90 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 WI2-2373I1.2A0A1W2PRP0 233 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 ZNF850A8MQ14 1090 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 RER1O15258 196 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 TCAPO15273 167 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 CYB5BO43169 146 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 TYMSP04818 313 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 PGA5P0DJD9 388 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 GZMBP10144 247 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 SLC25A6P12236 298 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 FABP4P15090 132 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 CRYGSP22914 178 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 FKBP2P26885 142 aaKnown RBP3.1□□□□□ -1.91
USP47-209ENST00000530041 CD200P41217 278 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 DYNLT3P51808 116 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 MLF1P58340 268 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 ZNF92Q03936 586 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 PRDX4Q13162 271 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 TAL2Q16559 108 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 PLPPR5Q32ZL2 321 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 ABCA11PQ4W5N1 156 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 NMSQ5H8A3 153 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 AKR1C8PQ5T2L2 129 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 C2orf66Q6UXQ4 117 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 C12orf54Q6X4T0 127 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 MRPL52Q86TS9 123 aaKnown RBP3.1□□□□□ -1.91
USP47-209ENST00000530041 H1FOOQ8IZA3 346 aaPredicted RBP3.1□□□□□ -1.91
USP47-209ENST00000530041 ZNF664Q8N3J9 261 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 SLC35G3Q8N808 338 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 OR1P1Q8NH06 330 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 OR4X1Q8NH49 305 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
USP47-209ENST00000530041 TMEM54Q969K7 222 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 ACY3Q96HD9 319 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 PACRGQ96M98 296 aaPredicted RBP3.1□□□□□ -1.91
USP47-209ENST00000530041 TP53RKQ96S44 253 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 PSMG3Q9BT73 122 aaPredicted RBP3.1□□□□□ -1.91
USP47-209ENST00000530041 FAAP24Q9BTP7 215 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 TMEM222Q9H0R3 208 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 PRO1933Q9H354 126 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 ZNF286AQ9HBT8 521 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 CALYQ9NYX4 217 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 POLR1DQ9Y2S0 133 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 RFNGQ9Y644 331 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 SRCAPQ6ZRS2 3230 aa3.1□□□□□ -1.91
USP47-209ENST00000530041 MYO7AQ13402 2215 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 IGLV3-12A0A075B6K2 115 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 IGKV1-27A0A075B6S5 117 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 PIGBOS1A0A0B4J2F0 54 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 IGKV1-12A0A0C4DH73 117 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 KIR2DL5BA0A0G2JN68 375 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 KIR2DL5BA0A0G2JPC4 375 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 A0A1B0GV50 99 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 EPOPA6NHQ4 379 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 FAM166BA8MTA8 275 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 ENSAO43768 121 aaKnown RBP3.09□□□□□ -1.91
USP47-209ENST00000530041 PDCD6O75340 191 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 PPYP01298 95 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 IGKV1D-12P01611 117 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 CT45A6P0DMU7 189 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 CT45A5P0DMU8 189 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 CT45A7P0DMV0 189 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 BCL2P10415 239 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 IGLL1P15814 213 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 GABRG2P18507 467 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 RAB4AP20338 218 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 FUT3P21217 361 aa3.09□□□□□ -1.91
USP47-209ENST00000530041 GNRHRP30968 328 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms