RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 PVRIGQ6DKI7 326 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 ZNF525Q8N782 197 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 ZSWIM8A7E2V4 1837 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 CDKN1AP38936 164 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 SLC25A28Q96A46 364 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 SS18L2Q9UHA2 77 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 A0A087WWC5 75 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 HOXA3O43365 443 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-221ENST00000529873 CIARTQ8N365 385 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-221ENST00000529873 LINC01587Q99440 93 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 IGHV3-35A0A0C4DH35 117 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 TGFAP01135 160 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 APOHP02749 345 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-221ENST00000529873 SRP19P09132 144 aaKnown RBP7.1□□□□□ -1.27
CTNND1-221ENST00000529873 MORN2Q502X0 79 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 WBP1Q96G27 269 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 SPANXDQ9BXN6 97 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 TRPM7Q96QT4 1865 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 PINLYPA6NC86 204 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 IGHV4-39P01824 125 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 CBLN1P23435 193 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 ATP5G3P48201 142 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 SRSF7Q16629 238 aaKnown RBP eCLIP7.1□□□□□ -1.271e-6■■□□□ 13.9
CTNND1-221ENST00000529873 TMEM133Q9H2Q1 129 aa7.1□□□□□ -1.27
CTNND1-221ENST00000529873 IGHV3OR16-13A0A075B7E8 117 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 IGHV3-74A0A0B4J1X5 117 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-221ENST00000529873 ST6GALNAC3Q8NDV1 305 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 RPRMQ9NS64 109 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 J3QRE1 110 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 M0R381 172 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 NTN3O00634 580 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-221ENST00000529873 NDUFC2O95298 119 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 FER1L6-AS1Q8NA97 138 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 SLC50A1Q9BRV3 221 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 CST9LQ9H4G1 147 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 DEPPQ9NTK1 212 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 IGHV3-49A0A0A0MS15 119 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 TRAV14DV4A0A0A6YYC5 116 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 TBX6O95947 436 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-221ENST00000529873 PLNP26678 52 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 GAGE13Q4V321 117 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 EDA2RQ9HAV5 297 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 TRAV12-3A0A0B4J271 114 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 A0A1W2PRX2 142 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 EGR1P18146 543 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 LCTP09848 1927 aa7.09□□□□□ -1.27
CTNND1-221ENST00000529873 SEC11AP67812 179 aa7.09□□□□□ -1.28
CTNND1-221ENST00000529873 JMJD8Q96S16 334 aa7.09□□□□□ -1.28
CTNND1-221ENST00000529873 MSGN1A6NI15 193 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 CRPP02741 224 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 MYOD1P15172 320 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 MPZP25189 248 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 STHQ8IWL8 128 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 RNF182Q8N6D2 247 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
CTNND1-221ENST00000529873 OTOFQ9HC10 1997 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 A0A1B0GUT8 65 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 E9PLN8 166 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 DSCR9P59020 149 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 OR10J3Q5JRS4 329 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 C18orf15Q96N68 181 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 VKORC1Q9BQB6 163 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 PRSS22Q9GZN4 317 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 CSTL1Q9H114 145 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 FBLN5Q9UBX5 448 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 NAPSAO96009 420 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 HIST1H4AP62805 103 aaKnown RBP7.08□□□□□ -1.28
CTNND1-221ENST00000529873 GAGE5Q13069 117 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 GAGE6Q13070 117 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 FNDC4Q9H6D8 234 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-221ENST00000529873 SIP14410 1827 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 TCRBV4S1A1TA0A5B7 111 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 TDGF1P13385 188 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 TOMM7Q9P0U1 55 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 SCN3AQ9NY46 2000 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 CCL3L1P16619 93 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 ZNF585BQ52M93 769 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM167AQ8TBQ9 72 aa7.08□□□□□ -1.28
CTNND1-221ENST00000529873 VWC2LB2RUY7 222 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 IGHV2-70P01814 119 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 SPACA3Q8IXA5 215 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM86BQ8N661 226 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 KIAA0100Q14667 2235 aaKnown RBP7.07□□□□□ -1.28
CTNND1-221ENST00000529873 A0A0A6YYD4 124 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 RNF222A6NCQ9 220 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 DUSP14O95147 198 aaKnown RBP7.07□□□□□ -1.28
CTNND1-221ENST00000529873 CD59P13987 128 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 GNG5P63218 68 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 ZNF479Q96JC4 524 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 BTCP35070 178 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 ASCL2Q99929 193 aa7.07□□□□□ -1.28
CTNND1-221ENST00000529873 IGKV1D-13A0A0B4J2D9 117 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 LINC01549A6NIU2 74 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 SNAI2O43623 268 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 IGHV1-46P01743 117 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 OR9G9P0C7N8 305 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 ZNF688P0C7X2 276 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 IGKV1-13P0DP09 117 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms