RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 TMEM230Q96A57 120 aa9.57□□□□□ -0.88
CPSF1-204ENST00000529288 RRNAD1Q96FB5 475 aaKnown RBP9.57□□□□□ -0.88
CPSF1-204ENST00000529288 ZNF486Q96H40 463 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-204ENST00000529288 MS4A6AQ9H2W1 248 aa9.57□□□□□ -0.88
CPSF1-204ENST00000529288 FBXL17Q9UF56 701 aa9.57□□□□□ -0.88
CPSF1-204ENST00000529288 DEFB4AO15263 64 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 RAB3DO95716 219 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 CA1P00915 261 aaPredicted RBP9.56□□□□□ -0.88
CPSF1-204ENST00000529288 OPRK1P41145 380 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
CPSF1-204ENST00000529288 MLANAQ16655 118 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 LHFPL1Q86WI0 220 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 ARRDC1Q8N5I2 433 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 OR4D10Q8NGI6 311 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 ZFAND1Q8TCF1 268 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 SOSTQ9BQB4 213 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 MTFP1Q9UDX5 166 aa9.56□□□□□ -0.88
CPSF1-204ENST00000529288 A0A1B0GU03 582 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 RGS5O15539 181 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 RNASE2P10153 161 aaKnown RBP9.55□□□□□ -0.88
CPSF1-204ENST00000529288 NPPCP23582 126 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 FAM24BQ8N5W8 94 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 STXBP6Q8NFX7 210 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 OR13C8Q8NGS7 320 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 TERB2Q8NHR7 220 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 C11orf45Q8TAV5 145 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 MARCH1Q8TCQ1 289 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 GATAD1Q8WUU5 269 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 TMEM231Q9H6L2 316 aa9.55□□□□□ -0.88
CPSF1-204ENST00000529288 A0A0G2JRQ6 117 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 TEX13DA0A0J9YY54 714 aaPredicted RBP9.54□□□□□ -0.88
CPSF1-204ENST00000529288 CORTO00230 105 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 CD74P04233 296 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 IFNA4P05014 189 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 CD5P06127 495 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 TAS2R19P59542 299 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 TMEM187Q14656 261 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 FAAP20Q6NZ36 180 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 STEAP1BQ6NZ63 245 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 STHQ8IWL8 128 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 TMEM229BQ8NBD8 167 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 METTL26Q96S19 204 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 VSIRQ9H7M9 311 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 ZFAND3Q9H8U3 227 aa9.54□□□□□ -0.88
CPSF1-204ENST00000529288 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
CPSF1-204ENST00000529288 A0A1W2PS18 150 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 GABARAPH6UMI1 98 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 CTDSPLO15194 276 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 CLN5O75503 358 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 SCGB2A1O75556 95 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 P0C879 139 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 ATF4P18848 351 aaPredicted RBP9.53□□□□□ -0.88
CPSF1-204ENST00000529288 TBPP20226 339 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 RBMS2Q15434 407 aaKnown RBP9.53□□□□□ -0.88
CPSF1-204ENST00000529288 TIGITQ495A1 244 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 RPP25LQ8N5L8 163 aaKnown RBP9.53□□□□□ -0.88
CPSF1-204ENST00000529288 C15orf40Q8WUR7 153 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 SMIM4Q8WVI0 70 aa9.53□□□□□ -0.88
CPSF1-204ENST00000529288 NARS2Q96I59 477 aaKnown RBP9.53□□□□□ -0.88
CPSF1-204ENST00000529288 FNDC4Q9H6D8 234 aaPredicted RBP9.53□□□□□ -0.88
CPSF1-204ENST00000529288 HEYLQ9NQ87 328 aaPredicted RBP9.53□□□□□ -0.88
CPSF1-204ENST00000529288 C14orf166Q9Y224 244 aaKnown RBP9.53□□□□□ -0.88
CPSF1-204ENST00000529288 CEBPZOSA8MTT3 80 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 ZNF701M0R085 212 aaPredicted RBP9.52□□□□□ -0.89
CPSF1-204ENST00000529288 NOL3O60936 208 aaKnown RBP9.52□□□□□ -0.89
CPSF1-204ENST00000529288 DEDDO75618 318 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 NXPH3O95157 252 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 UCP1P25874 307 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 TNFSF8P32971 234 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 Q6ZRM9 215 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 OR4X1Q8NH49 305 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 DIRAS2Q96HU8 199 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 MFFQ9GZY8 342 aa9.52□□□□□ -0.89
CPSF1-204ENST00000529288 RSL24D1Q9UHA3 163 aaKnown RBP9.52□□□□□ -0.89
CPSF1-204ENST00000529288 RPS10-NUDT3A0A1W2PQS6 291 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 KNCNA6PVL3 124 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 DISC1C4P0D8 188 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 INS-IGF2F8WCM5 200 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 P2RY1P47900 373 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 SPCS3P61009 180 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 MRPS10P82664 201 aaKnown RBP9.51□□□□□ -0.89
CPSF1-204ENST00000529288 SSBP1Q04837 148 aaKnown RBP9.51□□□□□ -0.89
CPSF1-204ENST00000529288 MCFD2Q8NI22 146 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 GPR146Q96CH1 333 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.51□□□□□ -0.89
CPSF1-204ENST00000529288 CACNG5Q9UF02 275 aa9.51□□□□□ -0.89
CPSF1-204ENST00000529288 TRAV2A0A0B4J234 112 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 GSTZ1O43708 216 aaPredicted RBP9.5□□□□□ -0.89
CPSF1-204ENST00000529288 HTR2BP41595 481 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 DHRS2Q13268 280 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 MEF2DQ14814 521 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 TMEM268Q5VZI3 342 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 PVRIGQ6DKI7 326 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 SELENOHQ8IZQ5 122 aaKnown RBP9.5□□□□□ -0.89
CPSF1-204ENST00000529288 LHFPL5Q8TAF8 219 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 Q8WTZ3 238 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 RTBDNQ9BSG5 229 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms