RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 NDUFA3O95167 84 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 C16orf82Q7Z2V1 217 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 LHFPL4Q7Z7J7 247 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 TMEM116Q8NCL8 245 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 IGFBPL1Q8WX77 278 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 ANAPC16Q96DE5 110 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 FAM167A-AS1Q96KT0 104 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 PYGO2Q9BRQ0 406 aa12.71□□□□□ -0.38
USH1C-204ENST00000526313 PCP4L1A6NKN8 68 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 CORTO00230 105 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 C8orf88P0DMB2 117 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 RPS10P46783 165 aaKnown RBP12.7□□□□□ -0.38
USH1C-204ENST00000526313 TAS2R45P59539 299 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 SRSF12Q8WXF0 261 aaKnown RBP12.7□□□□□ -0.38
USH1C-204ENST00000526313 DERL1Q9BUN8 251 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 SIRPDQ9H106 197 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 TACC2O95359 2948 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 OOSP1A8MZH6 123 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 RPL35P42766 123 aaKnown RBP12.7□□□□□ -0.38
USH1C-204ENST00000526313 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
USH1C-204ENST00000526313 RUSC1-AS1Q66K80 236 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 DMRT1Q9Y5R6 373 aa12.7□□□□□ -0.38
USH1C-204ENST00000526313 SCO2A0A1W2PP80 73 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 MOSP00540 346 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 CD99P14209 185 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 ZNF90Q03938 601 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 MINOS1Q5TGZ0 78 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 PATE2Q6UY27 113 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 VMO1Q7Z5L0 202 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 FAM210BQ96KR6 192 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 PFDN5Q99471 154 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 TRGV9Q99603 122 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 HILPDAQ9Y5L2 63 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 MINOS1-NBL1R4GNA1 71 aa12.69□□□□□ -0.38
USH1C-204ENST00000526313 TRBV20OR9-2A0A075B6H5 130 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 NBR2O15453 112 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 GOSR1O95249 250 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 IGHV3-48P01763 117 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 LMO4P61968 165 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 SNRPEP62304 92 aaKnown RBP12.68□□□□□ -0.38
USH1C-204ENST00000526313 OR1L4Q8NGR5 311 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 EAF1Q96JC9 268 aaPredicted RBP12.68□□□□□ -0.38
USH1C-204ENST00000526313 HOXB4P17483 251 aaPredicted RBP12.68□□□□□ -0.38
USH1C-204ENST00000526313 EBI3Q14213 229 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 C19orf35Q6ZS72 473 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 MISP3Q96FF7 219 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 SLC25A2Q9BXI2 301 aa12.68□□□□□ -0.38
USH1C-204ENST00000526313 IGHV2-70DA0A0C4DH43 119 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 H7BYZ3 331 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 UBE2CO00762 179 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 TGOLN2O43493 480 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 MMDQ15546 238 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 CCDC144NLQ6NUI1 221 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 Q8N6K4 173 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 UHRF2Q96PU4 802 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 TNFRSF19Q9NS68 423 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 CFAP46Q8IYW2 2715 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 A0A1W2PRE2 83 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 MORN5Q5VZ52 161 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 DYNAPQ8N1N2 210 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 LY96Q9Y6Y9 160 aa12.67□□□□□ -0.38
USH1C-204ENST00000526313 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 C9JCJ5 164 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 I3L2K1 104 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 OR7C2O60412 319 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 S100A6P06703 90 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 APELAP0DMC3 54 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 FBLN7Q53RD9 439 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 C10orf113Q5VZT2 155 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 OR2T10Q8NGZ9 312 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 OR4X1Q8NH49 305 aa12.66□□□□□ -0.38
USH1C-204ENST00000526313 ELOA3CA0A087WX78 387 aaPredicted RBP12.65□□□□□ -0.38
USH1C-204ENST00000526313 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 PHOX2AO14813 284 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 COX7A2P2O60397 106 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 BPIFB3P59826 476 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 PLP1P60201 277 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 PLGLAQ15195 96 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 SSX2Q16385 188 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 AP4M1O00189 453 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 SRP14P37108 136 aaKnown RBP12.65□□□□□ -0.38
USH1C-204ENST00000526313 GALR1P47211 349 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 LCN2P80188 198 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 OCC1Q8TAD7 63 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 BPESC1Q9GZL8 116 aa12.65□□□□□ -0.38
USH1C-204ENST00000526313 AJUBAQ96IF1 538 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 OR5B12Q96R08 314 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 TBX15Q96SF7 602 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 IMMP2LQ96T52 175 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 C12orf57Q99622 126 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 WNT10AQ9GZT5 417 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 ZNF355PQ9NSJ1 428 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
USH1C-204ENST00000526313 TBL2Q9Y4P3 447 aaKnown RBP12.64□□□□□ -0.39
USH1C-204ENST00000526313 A0A1W2PRD5 423 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 A0A1W2PRF3 423 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 A0A1W2PRM7 423 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms