RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 A0A0D9SG52 128 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 I3L2K1 104 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 K7EIM0 57 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 IGHV3-23P01764 117 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 ZP3P21754 424 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 SLURP1P55000 103 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 RAB14P61106 215 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 CLLU1Q5K131 121 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 THAP6Q8TBB0 222 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 ZNF502Q8TBZ5 544 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 PPP1R1CQ8WVI7 109 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 ARL6Q9H0F7 186 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 HIPK2Q9H2X6 1198 aa9.94□□□□□ -0.82
SMPD1-202ENST00000526280 BMPR1BO00238 502 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
SMPD1-202ENST00000526280 CLEC19AQ6UXS0 136 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 KCNRGQ8N5I3 272 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 DTD1Q8TEA8 209 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 DCUN1D4Q92564 292 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
SMPD1-202ENST00000526280 MISP3Q96FF7 219 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 RCC1LQ96I51 464 aaKnown RBP9.93□□□□□ -0.82
SMPD1-202ENST00000526280 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 NMES1Q9C002 83 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 TNFSF18Q9UNG2 199 aa9.93□□□□□ -0.82
SMPD1-202ENST00000526280 IGHV3-21A0A0B4J1V1 117 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 RPS10-NUDT3A0A1W2PQS6 291 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 PPP5D1E7EU14 171 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 CORTO00230 105 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 MED6O75586 246 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 MT-CO2P00403 227 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 CLEC3BP05452 202 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 IGLL1P15814 213 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 ID3Q02535 119 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 OR2F1Q13607 317 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 KLF5Q13887 457 aaPredicted RBP9.92□□□□□ -0.82
SMPD1-202ENST00000526280 IAH1Q2TAA2 248 aaPredicted RBP9.92□□□□□ -0.82
SMPD1-202ENST00000526280 C2orf83Q53S99 150 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 ACOT7LQ6ZUV0 252 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 SLC24A4Q8NFF2 622 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 OR4D5Q8NGN0 318 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 TMEM170AQ8WVE7 144 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 ATP6V0BQ99437 205 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 C21orf62Q9NYP8 219 aa9.92□□□□□ -0.82
SMPD1-202ENST00000526280 OVOL1O14753 267 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 SYNGR2O43760 224 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 GGCTO75223 188 aaKnown RBP9.91□□□□□ -0.82
SMPD1-202ENST00000526280 ARL3P36405 182 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 AP2S1P53680 142 aaPredicted RBP9.91□□□□□ -0.82
SMPD1-202ENST00000526280 ATP5IP56385 69 aaPredicted RBP9.91□□□□□ -0.82
SMPD1-202ENST00000526280 ZNF345Q14585 488 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 RPEL1Q2QD12 228 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 LRRC37A5PQ49AS3 106 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 SLC51BQ86UW2 128 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 PINX1Q96BK5 328 aaKnown RBP9.91□□□□□ -0.82
SMPD1-202ENST00000526280 C2orf50Q96LR7 162 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 CITED4Q96RK1 184 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 MCRIP2Q9BUT9 160 aaKnown RBP9.91□□□□□ -0.82
SMPD1-202ENST00000526280 RNF126Q9BV68 326 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 MAGT1Q9H0U3 335 aa9.91□□□□□ -0.82
SMPD1-202ENST00000526280 F8W735 103 aaPredicted RBP9.9□□□□□ -0.82
SMPD1-202ENST00000526280 OR2C1O95371 312 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 IFNA10P01566 189 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 NPY1RP25929 384 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 FCGR2BP31994 310 aaPredicted RBP9.9□□□□□ -0.82
SMPD1-202ENST00000526280 GPR183P32249 361 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 NKX2-1P43699 371 aaPredicted RBP9.9□□□□□ -0.82
SMPD1-202ENST00000526280 MFAP4P55083 255 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 INO80EQ8NBZ0 244 aaPredicted RBP9.9□□□□□ -0.82
SMPD1-202ENST00000526280 RNASEH2CQ8TDP1 164 aaKnown RBP9.9□□□□□ -0.82
SMPD1-202ENST00000526280 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.82
SMPD1-202ENST00000526280 TXN2Q99757 166 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 FNDC4Q9H6D8 234 aaPredicted RBP9.9□□□□□ -0.82
SMPD1-202ENST00000526280 GSKIPQ9P0R6 139 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 MBD2Q9UBB5 411 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 NOTCH1P46531 2555 aa9.9□□□□□ -0.82
SMPD1-202ENST00000526280 KANTRA0A1W2PQU2 76 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 RNF222A6NCQ9 220 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 OR2T8A6NH00 312 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 G3V4G9 280 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 WRBO00258 174 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 BCL2L11O43521 198 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 LY86O95711 162 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 IGHV3-48P01763 117 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 IAPPP10997 89 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 SYNJ2BPP57105 145 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 POLR2GP62487 172 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMPD1-202ENST00000526280 IL15RAQ13261 267 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 MLANAQ16655 118 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 GPHB5Q86YW7 130 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 C1QL4Q86Z23 238 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 PCNPQ8WW12 178 aaKnown RBP9.89□□□□□ -0.83
SMPD1-202ENST00000526280 BSCL2Q96G97 398 aaPredicted RBP9.89□□□□□ -0.83
SMPD1-202ENST00000526280 ZC4H2Q9NQZ6 224 aa9.89□□□□□ -0.83
SMPD1-202ENST00000526280 GAR1Q9NY12 217 aaKnown RBP9.89□□□□□ -0.83
SMPD1-202ENST00000526280 MEGF8Q7Z7M0 2845 aa9.88□□□□□ -0.83
SMPD1-202ENST00000526280 SEC14L6B5MCN3 397 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms