RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 DUSP18Q8NEJ0 188 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 TMEM170AQ8WVE7 144 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 GPR146Q96CH1 333 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 RRNAD1Q96FB5 475 aaKnown RBP8.88□□□□□ -0.99
SSBP3-210ENST00000525990 PDCD10Q9BUL8 212 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 SLIRPQ9GZT3 109 aaKnown RBP8.88□□□□□ -0.99
SSBP3-210ENST00000525990 C6orf62Q9GZU0 229 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-210ENST00000525990 CCDC59Q9P031 241 aaKnown RBP8.88□□□□□ -0.99
SSBP3-210ENST00000525990 CACNG5Q9UF02 275 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 GPR132Q9UNW8 380 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 C14orf166Q9Y224 244 aaKnown RBP8.88□□□□□ -0.99
SSBP3-210ENST00000525990 EPPK1P58107 5090 aaKnown RBP8.88□□□□□ -0.99
SSBP3-210ENST00000525990 ANKRD20A5PA0PJZ0 165 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 CRYM-AS1A6NIL9 109 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 DISC1C4P0D8 188 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 H3BMQ9 156 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 OPRK1P41145 380 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 NPBWR1P48145 328 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 MRPS10P82664 201 aaKnown RBP8.87□□□□□ -0.99
SSBP3-210ENST00000525990 SSBP1Q04837 148 aaKnown RBP8.87□□□□□ -0.99
SSBP3-210ENST00000525990 TIGITQ495A1 244 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 LEMD1Q68G75 181 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 ZNF600Q6ZNG1 722 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 Q6ZWC4 215 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 RAB2BQ8WUD1 216 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 C15orf40Q8WUR7 153 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 RBPMSQ93062 196 aaKnown RBP8.87□□□□□ -0.99
SSBP3-210ENST00000525990 RNF183Q96D59 192 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 VSIRQ9H7M9 311 aa8.87□□□□□ -0.99
SSBP3-210ENST00000525990 KIR2DL5BA0A0G2JN68 375 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 KIR2DL5BA0A0G2JPC4 375 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 CTDSPLO15194 276 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 ATG12O94817 140 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 IGKV1-17P01599 117 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 BMI1P35226 326 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 TMBIM6P55061 237 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 AARDQ4LEZ3 155 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 KIR2DL5AQ8N109 375 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 STPG3Q8N7X2 389 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 GALNT14Q96FL9 552 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 GINS3Q9BRX5 216 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 ENY2Q9NPA8 101 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 TP53TG1Q9Y2A0 90 aa8.86□□□□□ -0.99
SSBP3-210ENST00000525990 CXorf65A6NEN9 183 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 GSTZ1O43708 216 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-210ENST00000525990 CLN5O75503 358 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 JTBO76095 146 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 TNFSF8P32971 234 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 SUB1P53999 127 aaKnown RBP eCLIP8.85□□□□□ -0.99
SSBP3-210ENST00000525990 DEFB131AP59861 70 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 SPCS3P61009 180 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 RPL11P62913 178 aaKnown RBP8.85□□□□□ -0.99
SSBP3-210ENST00000525990 SUPT4H1P63272 117 aaKnown RBP8.85□□□□□ -0.99
SSBP3-210ENST00000525990 TNFRSF9Q07011 255 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 TMEM187Q14656 261 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 SURF2Q15527 256 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-210ENST00000525990 OR4X1Q8NH49 305 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 SOSTQ9BQB4 213 aa8.85□□□□□ -0.99
SSBP3-210ENST00000525990 HEYLQ9NQ87 328 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-210ENST00000525990 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-210ENST00000525990 ALMS1Q8TCU4 4167 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 CORTO00230 105 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 UBE2CO00762 179 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 B3GALNT1O75752 331 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 RND2P52198 227 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 DHODHQ02127 395 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 RBMS2Q15434 407 aaKnown RBP8.84□□□□□ -0.99
SSBP3-210ENST00000525990 PRSS54Q6PEW0 395 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 FAM219AQ8IW50 185 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 OR52E5Q8NH55 327 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 PRRT1Q99946 306 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 MCUBQ9NWR8 336 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 RABAC1Q9UI14 185 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 TMEM56-RWDD3S4R434 201 aa8.84□□□□□ -0.99
SSBP3-210ENST00000525990 CEBPZOSA8MTT3 80 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 DEFB4AO15263 64 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 IGLC1P0CG04 106 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 AKR1C4P17516 323 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 NPPCP23582 126 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 CRYBB3P26998 211 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 RPL5P46777 297 aaKnown RBP8.83□□□□□ -1
SSBP3-210ENST00000525990 C2orf83Q53S99 150 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 LYZL2Q7Z4W2 148 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 SLC24A4Q8NFF2 622 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 STXBP6Q8NFX7 210 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 MCFD2Q8NI22 146 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 TRIM63Q969Q1 353 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 CSTL1Q9H114 145 aa8.83□□□□□ -1
SSBP3-210ENST00000525990 FABP12A6NFH5 140 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 MPTX1A8MV57 137 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 K7EQG2 157 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 DNASE2O00115 360 aaPredicted RBP8.82□□□□□ -1
SSBP3-210ENST00000525990 CA1P00915 261 aaPredicted RBP8.82□□□□□ -1
SSBP3-210ENST00000525990 ZNF688P0C7X2 276 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 SULT1A3P0DMM9 295 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 SULT1A4P0DMN0 295 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 HTR2BP41595 481 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 P2RY1P47900 373 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms