RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 WDR89Q96FK6 387 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC4-204ENST00000524797 BSCL2Q96G97 398 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC4-204ENST00000524797 ATP6V0BQ99437 205 aa8.41□□□□□ -1.06
TRAPPC4-204ENST00000524797 SLC2A8Q9NY64 477 aa8.41□□□□□ -1.06
TRAPPC4-204ENST00000524797 C21orf62Q9NYP8 219 aa8.41□□□□□ -1.06
TRAPPC4-204ENST00000524797 C3orf85A0A1B0GTC6 90 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 F8W735 103 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 CTSDP07339 412 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 HSPE1P61604 102 aaKnown RBP8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 MEF2DQ14814 521 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 FCN2Q15485 313 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 SCGB2B2Q4G0G5 96 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 TMEM61Q8N0U2 210 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 MARC2Q969Z3 335 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 COPZ2Q9P299 210 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 UFC1Q9Y3C8 167 aa8.4□□□□□ -1.06
TRAPPC4-204ENST00000524797 RPS10-NUDT3A0A1W2PQS6 291 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 DISC1C4P0D8 188 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 C3orf84H3BNL1 204 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 FAAP20Q6NZ36 180 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 SPSB3Q6PJ21 355 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 BTNL8Q6UX41 500 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 LINC00322Q6ZN03 302 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 DEFB125Q8N687 156 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 ZNF114Q8NC26 417 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 CHRDL1Q9BU40 450 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 WFDC10AQ9H1F0 79 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 MRPL27Q9P0M9 148 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 C7orf66A4D0T2 115 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 ZNF98A6NK75 572 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 CLN5O75503 358 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 ATG12O94817 140 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 AKAIN1P0CW23 69 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 C4BPBP20851 252 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 UCP1P25874 307 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 SP6Q3SY56 376 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 Q56UQ5 140 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 OR4C16Q8NGL9 310 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 C14orf166Q9Y224 244 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-204ENST00000524797 DNAH7Q8WXX0 4024 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 RBMY1BA6NDE4 496 aaKnown RBP8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 RBMY1EA6NEQ0 496 aaKnown RBP8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 I3L2K1 104 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 NDUFA4O00483 81 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 ST8SIA3O43173 380 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 GSTZ1O43708 216 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 RBMY1DP0C7P1 496 aaKnown RBP8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 ADMP35318 185 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 AKR1C2P52895 323 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 ERHP84090 104 aaKnown RBP8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 SPINK9Q5DT21 86 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 UBAC2Q8NBM4 344 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 MUC7Q8TAX7 377 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 RTBDNQ9BSG5 229 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 SRD5A3Q9H8P0 318 aa8.38□□□□□ -1.07
TRAPPC4-204ENST00000524797 A0A0G2JRQ6 117 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 ANKRD20A5PA0PJZ0 165 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 OR11H12B2RN74 326 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 SCAF4O95104 1147 aaKnown RBP8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 MFAP4P55083 255 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 NAA60Q9H7X0 242 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 INS-IGF2F8WCM5 200 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 MT-CO2P00403 227 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 CTSGP08311 255 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 FCGR2BP31994 310 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 NUP62P37198 522 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 BTN1A1Q13410 526 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 SURF2Q15527 256 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 SLC35G3Q8N808 338 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 OR11H7Q8NGC8 314 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 OR52B4Q8NGK2 314 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 TXN2Q99757 166 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 TMEM222Q9H0R3 208 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 GAR1Q9NY12 217 aaKnown RBP8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 GPR132Q9UNW8 380 aa8.37□□□□□ -1.07
TRAPPC4-204ENST00000524797 TEX13DA0A0J9YY54 714 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 KRBOX1C9JBD0 128 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 K7EMT4 169 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 ZNF207O43670 478 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 OR5AC1P0C628 307 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 DHODHQ02127 395 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 LGALSLQ3ZCW2 172 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 SLC16A13Q7RTY0 426 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 SELENOHQ8IZQ5 122 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 OR11H4Q8NGC9 324 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 RNASE11Q8TAA1 199 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 RRNAD1Q96FB5 475 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 PRRT1Q99946 306 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 C20orf24Q9BUV8 137 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 C5orf66Q9H5L9 145 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 EDA2RQ9HAV5 297 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 RETNQ9HD89 108 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 DAZ1Q9NQZ3 744 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 SCP2D1Q9UJQ7 156 aa8.36□□□□□ -1.07
TRAPPC4-204ENST00000524797 IGHV3OR16-8A0A075B7F1 116 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms