RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 OPRK1P41145 380 aa11.88□□□□□ -0.51
HIF3A-208ENST00000524533 PVRIGQ6DKI7 326 aa11.88□□□□□ -0.51
HIF3A-208ENST00000524533 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
HIF3A-208ENST00000524533 STXBP6Q8NFX7 210 aa11.88□□□□□ -0.51
HIF3A-208ENST00000524533 RNASE11Q8TAA1 199 aaKnown RBP11.88□□□□□ -0.51
HIF3A-208ENST00000524533 KLK11Q9UBX7 282 aa11.88□□□□□ -0.51
HIF3A-208ENST00000524533 A0A1W2PS18 150 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 CLN5O75503 358 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 TBPP20226 339 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 ETV6P41212 452 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 RORCP51449 518 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 MZT2AQ6P582 158 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 C2CD4CQ8TF44 421 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 NARS2Q96I59 477 aaKnown RBP11.87□□□□□ -0.51
HIF3A-208ENST00000524533 METTL26Q96S19 204 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-208ENST00000524533 MRPL36Q9P0J6 103 aaKnown RBP11.87□□□□□ -0.51
HIF3A-208ENST00000524533 COPZ2Q9P299 210 aa11.87□□□□□ -0.51
HIF3A-208ENST00000524533 A0A0G2JRQ6 117 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 P2RY1P47900 373 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 SP6Q3SY56 376 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 ZFAND1Q8TCF1 268 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 AP3S1Q92572 193 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 TMEM230Q96A57 120 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 RRNAD1Q96FB5 475 aaKnown RBP11.86□□□□□ -0.51
HIF3A-208ENST00000524533 EXTL2Q9UBQ6 330 aa11.86□□□□□ -0.51
HIF3A-208ENST00000524533 K7EQG2 157 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 UCP1P25874 307 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 CRYBB3P26998 211 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 TCTAP57738 103 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 SCGB2B2Q4G0G5 96 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 TMEM41BQ5BJD5 291 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 TRPT1Q86TN4 253 aaKnown RBP11.85□□□□□ -0.51
HIF3A-208ENST00000524533 Q8NAQ8 132 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 OR4D10Q8NGI6 311 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 MTFP1Q9UDX5 166 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 DNAH10Q8IVF4 4471 aa11.85□□□□□ -0.51
HIF3A-208ENST00000524533 B3GALNT1O75752 331 aa11.84□□□□□ -0.51
HIF3A-208ENST00000524533 ZNF688P0C7X2 276 aa11.84□□□□□ -0.51
HIF3A-208ENST00000524533 SPP1P10451 314 aa11.84□□□□□ -0.51
HIF3A-208ENST00000524533 RPL5P46777 297 aaKnown RBP11.84□□□□□ -0.51
HIF3A-208ENST00000524533 BSXQ3C1V8 233 aa11.84□□□□□ -0.51
HIF3A-208ENST00000524533 MORN3Q6PF18 240 aaPredicted RBP11.84□□□□□ -0.51
HIF3A-208ENST00000524533 TERB2Q8NHR7 220 aa11.84□□□□□ -0.51
HIF3A-208ENST00000524533 HECTD4Q9Y4D8 3996 aa11.84□□□□□ -0.51
HIF3A-208ENST00000524533 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 IGHV4-28A0A0C4DH34 117 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 RPS10-NUDT3A0A1W2PQS6 291 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 C11orf94C9JXX5 98 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 TAS2R19P59542 299 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 SPCS3P61009 180 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 PRR20EP86478 221 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 PRR20CP86479 221 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 PRR20DP86480 221 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 PRR20BP86481 221 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 PRR20AP86496 221 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 MLANAQ16655 118 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 TIGITQ495A1 244 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 FAM219AQ8IW50 185 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 MARCH1Q8TCQ1 289 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 C15orf40Q8WUR7 153 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 HRH4Q9H3N8 390 aa11.83□□□□□ -0.52
HIF3A-208ENST00000524533 KNCNA6PVL3 124 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 IGLL5B9A064 214 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 RAB3DO95716 219 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 IGKV1-17P01599 117 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 CD74P04233 296 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-208ENST00000524533 MIFP14174 115 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 ZNF182P17025 639 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-208ENST00000524533 C4BPBP20851 252 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 HTR2BP41595 481 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 EIF2B2P49770 351 aaKnown RBP11.82□□□□□ -0.52
HIF3A-208ENST00000524533 Q6ZRM9 215 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 DCANP1Q8TF63 244 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 ABHD1Q96SE0 405 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 NAA50Q9GZZ1 169 aaKnown RBP11.82□□□□□ -0.52
HIF3A-208ENST00000524533 TMEM222Q9H0R3 208 aa11.82□□□□□ -0.52
HIF3A-208ENST00000524533 VPS13DQ5THJ4 4388 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 GABARAPO95166 117 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 OR5AC1P0C628 307 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 RBMY1A1P0DJD3 496 aaKnown RBP11.81□□□□□ -0.52
HIF3A-208ENST00000524533 RBMY1CP0DJD4 496 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 DHRS2Q13268 280 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 RBMY1FQ15415 496 aaKnown RBP11.81□□□□□ -0.52
HIF3A-208ENST00000524533 AARDQ4LEZ3 155 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 ACTL10Q5JWF8 245 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 STEAP1BQ6NZ63 245 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 OR1S2Q8NGQ3 325 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 HEYLQ9NQ87 328 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-208ENST00000524533 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-208ENST00000524533 APLNQ9ULZ1 77 aa11.81□□□□□ -0.52
HIF3A-208ENST00000524533 C14orf166Q9Y224 244 aaKnown RBP11.81□□□□□ -0.52
HIF3A-208ENST00000524533 AGRNO00468 2067 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 DNAH6Q9C0G6 4158 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms