RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SRRQ9GZT4 340 aa13.37□□□□□ -0.27
TRAPPC9-211ENST00000521700 HEYLQ9NQ87 328 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-211ENST00000521700 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-211ENST00000521700 A0A0B4J2A0 478 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 IGHV7-4-1A0A0J9YVY3 117 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 SULT1A3P0DMM9 295 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 SULT1A4P0DMN0 295 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 ANXA3P12429 323 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 HTR2BP41595 481 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 LAMTOR1Q6IAA8 161 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 TOMM20LQ6UXN7 152 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 TMED4Q7Z7H5 227 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 LGI3Q8N145 548 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 SHPKQ9UHJ6 478 aa13.36□□□□□ -0.27
TRAPPC9-211ENST00000521700 IGHV3-49A0A0A0MS15 119 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 CHEK1O14757 476 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 NXPH3O95157 252 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 OPRK1P41145 380 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 BAK1Q16611 211 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 TMEM128Q5BJH2 165 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 RNF2Q99496 336 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 RHPN1-AS1Q9BWJ2 59 aa13.35□□□□□ -0.27
TRAPPC9-211ENST00000521700 TRAV14DV4A0A0A6YYC5 116 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 CLN5O75503 358 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 CCR6P51684 374 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 SRPXP78539 464 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 C2orf83Q53S99 150 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 ZNF600Q6ZNG1 722 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 OR4X1Q8NH49 305 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 TMEM170AQ8WVE7 144 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
TRAPPC9-211ENST00000521700 SMCO1Q147U7 214 aa13.33□□□□□ -0.28
TRAPPC9-211ENST00000521700 SLC24A4Q8NFF2 622 aa13.33□□□□□ -0.28
TRAPPC9-211ENST00000521700 ZFAND3Q9H8U3 227 aa13.33□□□□□ -0.28
TRAPPC9-211ENST00000521700 RETNQ9HD89 108 aa13.33□□□□□ -0.28
TRAPPC9-211ENST00000521700 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.28
TRAPPC9-211ENST00000521700 CACFD1Q9UGQ2 172 aa13.33□□□□□ -0.28
TRAPPC9-211ENST00000521700 PUS1Q9Y606 427 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAPPC9-211ENST00000521700 IGHV3OR16-13A0A075B7E8 117 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 IGHV3-74A0A0B4J1X5 117 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 A0A1B0GU03 582 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 C3orf84H3BNL1 204 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 VAMP1P23763 118 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 TNFRSF9Q07011 255 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 MUC7Q8TAX7 377 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 RNASEH2CQ8TDP1 164 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 GINS3Q9BRX5 216 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 EDA2RQ9HAV5 297 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 NDUFA13Q9P0J0 144 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 NBEAL2Q6ZNJ1 2754 aa13.32□□□□□ -0.28
TRAPPC9-211ENST00000521700 RPS10-NUDT3A0A1W2PQS6 291 aa13.31□□□□□ -0.28
TRAPPC9-211ENST00000521700 OR4C46A6NHA9 309 aa13.31□□□□□ -0.28
TRAPPC9-211ENST00000521700 APOHP02749 345 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-211ENST00000521700 FAM90A2PQ658T7 463 aa13.31□□□□□ -0.28
TRAPPC9-211ENST00000521700 PRSS54Q6PEW0 395 aa13.31□□□□□ -0.28
TRAPPC9-211ENST00000521700 LRTM2Q8N967 370 aa13.31□□□□□ -0.28
TRAPPC9-211ENST00000521700 RBKSQ9H477 322 aa13.31□□□□□ -0.28
TRAPPC9-211ENST00000521700 KMT2CQ8NEZ4 4911 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 DUXBA0A1W2PPF3 345 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 PITX3O75364 302 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 SFT2D2O95562 160 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 IGKV1-17P01599 117 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 NPY1RP25929 384 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 INPP1P49441 399 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 PPP1R1AQ13522 171 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 RBMS2Q15434 407 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 TIGITQ495A1 244 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 TRIQKQ629K1 86 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 CENPSQ8N2Z9 138 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 LILRB2Q8N423 598 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 OR1S1Q8NH92 325 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 DTD1Q8TEA8 209 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 VSIRQ9H7M9 311 aa13.3□□□□□ -0.28
TRAPPC9-211ENST00000521700 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 TRAV30A0A087WSZ9 112 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 LOC102724200A0A096LPH7 203 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 PIGBOS1A0A0B4J2F0 54 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 NAP1L6A6NFF2 107 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 SLC25A4P12235 298 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 NOXA1Q86UR1 476 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 ST8SIA2Q92186 375 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 FAM110AQ9BQ89 295 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 U3KQ87 197 aa13.29□□□□□ -0.28
TRAPPC9-211ENST00000521700 IGHV3-66A0A0C4DH42 116 aa13.28□□□□□ -0.28
TRAPPC9-211ENST00000521700 LINC00854A0A1B0GVQ3 168 aa13.28□□□□□ -0.28
TRAPPC9-211ENST00000521700 IFNA10P01566 189 aa13.28□□□□□ -0.28
TRAPPC9-211ENST00000521700 IGLC1P0CG04 106 aa13.28□□□□□ -0.28
TRAPPC9-211ENST00000521700 TFPI2P48307 235 aa13.28□□□□□ -0.28
TRAPPC9-211ENST00000521700 RND2P52198 227 aa13.28□□□□□ -0.28
TRAPPC9-211ENST00000521700 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms