RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 TNFRSF19Q9NS68 423 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 IDI2-AS1Q9NZ38 188 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 ZNRD1Q9P1U0 126 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGHV1-69-2A0A0G2JMI3 117 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 C15orf65H3BRN8 121 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 BPIFB3P59826 476 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 UTF1Q5T230 341 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PDPNQ86YL7 162 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 NPIPB3Q92617 1050 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 GSX1Q9H4S2 264 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 A0A1W2PRE2 83 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PGPA6NDG6 321 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PEX7O00628 323 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 UQCRFS1P47985 274 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRR20EP86478 221 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRR20CP86479 221 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRR20DP86480 221 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRR20BP86481 221 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRR20AP86496 221 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 TRIP6Q15654 476 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 SMIM15Q7Z3B0 74 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 OR1B1Q8NGR6 318 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 HARBI1Q96MB7 349 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 CHRDL1Q9BU40 450 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 PSG1P11464 419 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 ZNF138P52744 262 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 CT45A1Q5HYN5 189 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 KIR3DL3Q8N743 410 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 CT45A3Q8NHU0 189 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 SLC25A33Q9BSK2 321 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 RAB9BQ9NP90 201 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 SPRR3Q9UBC9 169 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGKV1D-17A0A075B6S4 117 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGHV2-26A0A0B4J1V2 119 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 ZNF891A8MT65 544 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 J3QW42 95 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 M0R1B8 84 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 P01737 135 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 VWA1Q6PCB0 445 aa10.5□□□□□ -0.73
TRAPPC9-208ENST00000520857 FAM90A9PA6NNJ1 464 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 ENSAO43768 121 aaKnown RBP10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 TMPRSS3P57727 454 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 RBX1P62877 108 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 FAM214BQ7L5A3 538 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 TMEM178AQ8NBL3 297 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 GRAMD2BQ96HH9 432 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 HES4Q9HCC6 221 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 CACNA1HO95180 2353 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 TRGV8A0A0C4DH27 118 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 MUC21A0A0G2JKD1 596 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 MUC21A0A140T8X8 626 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 OR2T8A6NH00 312 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGKV1-16P04430 117 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 REG1AP05451 166 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 HTR1DP28221 377 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 MORN5Q5VZ52 161 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 FER1L6-AS2Q96M78 137 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 MRPL27Q9P0M9 148 aaKnown RBP10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 SMIM27A0A1W2PRY6 76 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 TMEM177Q53S58 311 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRR7Q8TB68 274 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 CCL13Q99616 98 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 MAP1LC3CQ9BXW4 147 aa10.49□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGKV1OR2-108A0A075B7D4 117 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRSS46E5RG02 174 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 CCL11P51671 97 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 PNKDQ8N490 385 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 ITLN1Q8WWA0 313 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 FLYWCH2Q96CP2 140 aaKnown RBP10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 C1orf159Q96HA4 380 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 ADTRPQ96IZ2 230 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 DYSFO75923 2080 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 MOSP00540 346 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 HBBP68871 147 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 RNFT1Q5M7Z0 435 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 FAM162BQ5T6X4 162 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 MMP23AO75900 390 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 LINC00173Q6ZV60 143 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 H1FXQ92522 213 aaKnown RBP10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 NEUROG1Q92886 237 aa10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 FOXA2Q9Y261 457 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC9-208ENST00000520857 TET2Q6N021 2002 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 A0A087X0K7 114 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 COL8A1P27658 744 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 C10orf55Q5SWW7 151 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 C12orf54Q6X4T0 127 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 OR1L4Q8NGR5 311 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGLC7A0M8Q6 106 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 A8MWL6 223 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 C9orf172C9J069 976 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 ITGB1BP1O14713 200 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 SAA1P0DJI8 122 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 Q6ZT83 130 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 HCP5Q6MZN7 132 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 LINC00305Q7Z4B0 112 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms