RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 A0A0G2JLM5 398 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 FAM223BA6NKX1 122 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 F8W735 103 aaPredicted RBP11.84□□□□□ -0.51
LSM1-203ENST00000520755 CORTO00230 105 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 C1QBP02746 253 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 IFNA4P05014 189 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 SULT1A1P50225 295 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 RAB11AP62491 216 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 RPP30P78346 268 aaKnown RBP11.84□□□□□ -0.51
LSM1-203ENST00000520755 NHLH2Q02577 135 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 CD69Q07108 199 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 OR8G2PQ6IF36 304 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 ACOT7LQ6ZUV0 252 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 FAM223AQ8IWN6 122 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 CCDC140Q96MF4 163 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 AQP10Q96PS8 301 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 DUX3Q96PT4 197 aa11.84□□□□□ -0.51
LSM1-203ENST00000520755 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 PF4P02776 101 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 LGALS1P09382 135 aaKnown RBP11.83□□□□□ -0.52
LSM1-203ENST00000520755 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
LSM1-203ENST00000520755 OPRK1P41145 380 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 ATP5G2Q06055 141 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 EXOSC2Q13868 293 aaKnown RBP11.83□□□□□ -0.52
LSM1-203ENST00000520755 SLC16A13Q7RTY0 426 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 NOXA1Q86UR1 476 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 ZNF502Q8TBZ5 544 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 SCARB1Q8WTV0 552 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 USMG5Q96IX5 58 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 HSPB11Q9Y547 144 aa11.83□□□□□ -0.52
LSM1-203ENST00000520755 I3L521 148 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 ARPC5O15511 151 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 CYB5BO43169 146 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 SLC38A11Q08AI6 406 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 STX12Q86Y82 276 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 TMEM217Q8N7C4 229 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 VN1R17PQ8TDU5 208 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 RAX2Q96IS3 184 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 THYN1Q9P016 225 aa11.82□□□□□ -0.52
LSM1-203ENST00000520755 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 HMSDA8MTL9 139 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 CCL24O00175 119 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 TRBV12-3P01733 135 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 DLK1P80370 383 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 BAXQ07812 192 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 PRR31Q5SQ13 230 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 OR11H1Q8NG94 326 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 OR10P1Q8NGE3 313 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 ZNF414Q96IQ9 312 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 SLC25A31Q9H0C2 315 aa11.81□□□□□ -0.52
LSM1-203ENST00000520755 CXCL2P19875 107 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 GPX4P36969 197 aaPredicted RBP11.8□□□□□ -0.52
LSM1-203ENST00000520755 MYCNOSP40205 109 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 RUNX1Q01196 453 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 GAMTQ14353 236 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 VWC2Q2TAL6 325 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 ZNF343Q6P1L6 599 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 OR5C1Q8NGR4 320 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 DPF1Q92782 380 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 CXorf58Q96LI9 332 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 WFDC1Q9HC57 220 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 C21orf62Q9NYP8 219 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 WNK1Q9H4A3 2382 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 TRRAPQ9Y4A5 3859 aa11.8□□□□□ -0.52
LSM1-203ENST00000520755 IGHV4OR15-8A0A075B7B6 117 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 IGKV1OR2-108A0A075B7D4 117 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 A0A087WW49 117 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.79□□□□□ -0.52
LSM1-203ENST00000520755 RPS10-NUDT3A0A1W2PQS6 291 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 PFDN1O60925 122 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 FCGR2BP31994 310 aaPredicted RBP11.79□□□□□ -0.52
LSM1-203ENST00000520755 RND2P52198 227 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 ZFP69Q49AA0 526 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 TREML4Q6UXN2 200 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 TMEM116Q8NCL8 245 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 OR4X1Q8NH49 305 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 CACNG8Q8WXS5 425 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 EEF1AKMT3Q96AZ1 226 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 SMIM3Q9BZL3 60 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 MFFQ9GZY8 342 aa11.79□□□□□ -0.52
LSM1-203ENST00000520755 IGKV1D-37A0A075B6S9 117 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 TRBV7-1A0A0A6YYK4 115 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 FNDC10F2Z333 226 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 BOLA2-SMG1P6H3BVE0 249 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 SCAF4O95104 1147 aaKnown RBP11.78□□□□□ -0.52
LSM1-203ENST00000520755 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
LSM1-203ENST00000520755 GPR183P32249 361 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 EIF2B2P49770 351 aaKnown RBP11.78□□□□□ -0.52
LSM1-203ENST00000520755 NKX2-5P52952 324 aaPredicted RBP11.78□□□□□ -0.52
LSM1-203ENST00000520755 AP2S1P53680 142 aaPredicted RBP11.78□□□□□ -0.52
LSM1-203ENST00000520755 HBG1P69891 147 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 HBG2P69892 147 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 ZNF616Q08AN1 781 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 ZNF345Q14585 488 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 CLINT1Q14677 625 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 ETFRF1Q6IPR1 90 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms