RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 KCTD21Q4G0X4 260 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 OR2T5Q6IEZ7 315 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 Q6ZTI0 123 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 MOB1BQ7L9L4 216 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 HSD17B11Q8NBQ5 300 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 OR2T29Q8NH02 315 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 VSTM2AQ8TAG5 236 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 LINC00052Q96N35 136 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 TXN2Q99757 166 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 HOPXQ9BPY8 73 aaPredicted RBP4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 RIMS4Q9H426 269 aaPredicted RBP4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 NRN1Q9NPD7 142 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 BET1LQ9NYM9 111 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 RPH3ALQ9UNE2 315 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 ICOSQ9Y6W8 199 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 TRAV5A0A0B4J249 113 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 A0A0G2JND7 137 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 PHOX2AO14813 284 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 GNG7O60262 68 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 TMEM50AO95807 157 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 RPSAP08865 295 aaKnown RBP4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 TRAPPC2P0DI81 140 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 TRAPPC2BP0DI82 140 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 ANXA8P13928 327 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 UCP1P25874 307 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 VSNL1P62760 191 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 KCTD9Q7L273 389 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 AMIGO2Q86SJ2 522 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 C10orf126Q8N4M7 172 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 OR11H7Q8NGC8 314 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 MOB3AQ96BX8 217 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 TLCD1Q96CP7 247 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 C4orf36Q96KX1 117 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 METTL26Q96S19 204 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 CABLES2Q9BTV7 478 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 SCPEP1Q9HB40 452 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 NDUFA4L2Q9NRX3 87 aa4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 WARS2Q9UGM6 360 aaKnown RBP4.19□□□□□ -1.74
CTNNA1-216ENST00000519489 A0A0D9SG52 128 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 FOXI3A8MTJ6 420 aaPredicted RBP4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 TRDCB7Z8K6 153 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 PRAF2O60831 178 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 ZNF324O75467 553 aaPredicted RBP4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 INSP01308 110 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 SRMP19623 302 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 GTF2A1P52655 376 aaPredicted RBP4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 TAS2R43P59537 309 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 TAS2R60P59551 318 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 MAGOHP61326 146 aaKnown RBP4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 MORN5Q5VZ52 161 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 AWAT2Q6E213 333 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 XAF1Q6GPH4 301 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 GID4Q8IVV7 300 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 OR5AK2Q8NH90 309 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 GPR146Q96CH1 333 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 C16orf74Q96GX8 76 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 DNAJC30Q96LL9 226 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 NSMCE2Q96MF7 247 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 LINC01587Q99440 93 aa4.18□□□□□ -1.74
CTNNA1-216ENST00000519489 IGKV1D-8A0A087WSZ0 117 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 IGKV1D-13A0A0B4J2D9 117 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 TMEM212A6NML5 194 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 FABP7O15540 132 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 IGKV1-17P01599 117 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 ALPLP05186 524 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 IGKV1-13P0DP09 117 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 COX4I1P13073 169 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 TMEM50BP56557 158 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 PRR3P79522 188 aaKnown RBP4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 MT1HP80294 61 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 MAPRE2Q15555 327 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 C12orf73Q69YU5 71 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 TMEM144Q7Z5S9 345 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 JAGN1Q8N5M9 183 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 OR8J1Q8NGP2 316 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 OR4S2Q8NH73 311 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 MAFIPQ8WZ33 124 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 C16orf45Q96MC5 204 aaPredicted RBP4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 COMMD5Q9GZQ3 224 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 DCSTAMPQ9H295 470 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 HRASLSQ9HDD0 168 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 NKIRAS1Q9NYS0 192 aa4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 RBMX2Q9Y388 322 aaKnown RBP4.17□□□□□ -1.74
CTNNA1-216ENST00000519489 ZNF98A6NK75 572 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 C9JCJ5 164 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 LINC01556Q5JQF7 62 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 NEGR1Q7Z3B1 354 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 H1FOOQ8IZA3 346 aaPredicted RBP4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 OR4A4PQ8NGN8 299 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 OR1P1Q8NH06 330 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 TMEM263Q8WUH6 116 aaKnown RBP4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 TCTEX1D2Q8WW35 142 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 RIBC2Q9H4K1 309 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 BABAM2Q9NXR7 383 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 DOK5Q9P104 306 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 ARL2BPQ9Y2Y0 163 aa4.16□□□□□ -1.74
CTNNA1-216ENST00000519489 NSG2Q9Y328 171 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms