RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 Q6ZRM9 215 aa13.85□□□□□ -0.19
HOXA3-203ENST00000518451 GALNT14Q96FL9 552 aa13.85□□□□□ -0.19
HOXA3-203ENST00000518451 HEYLQ9NQ87 328 aaPredicted RBP13.85□□□□□ -0.19
HOXA3-203ENST00000518451 KMT2CQ8NEZ4 4911 aaKnown RBP13.85□□□□□ -0.19
HOXA3-203ENST00000518451 A0A0G2JRQ6 117 aa13.84□□□□□ -0.19
HOXA3-203ENST00000518451 TMEM50AO95807 157 aa13.84□□□□□ -0.19
HOXA3-203ENST00000518451 ANXA3P12429 323 aa13.84□□□□□ -0.19
HOXA3-203ENST00000518451 PAFAH1B2P68402 229 aa13.84□□□□□ -0.19
HOXA3-203ENST00000518451 ZNF600Q6ZNG1 722 aa13.84□□□□□ -0.19
HOXA3-203ENST00000518451 TRAV30A0A087WSZ9 112 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 RPS10-NUDT3A0A1W2PQS6 291 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 OPRK1P41145 380 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 APOC4P55056 127 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 PYDC2Q56P42 97 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 TOMM20LQ6UXN7 152 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 NOXA1Q86UR1 476 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 LHFPL5Q8TAF8 219 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 GPR146Q96CH1 333 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 RNF2Q99496 336 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 RETNQ9HD89 108 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 CACNG5Q9UF02 275 aa13.83□□□□□ -0.2
HOXA3-203ENST00000518451 CEBPZOSA8MTT3 80 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 UBE2CO00762 179 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 CLN5O75503 358 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 SULT1A3P0DMM9 295 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 SULT1A4P0DMN0 295 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 AKR1C4P17516 323 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 SRPXP78539 464 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 BSXQ3C1V8 233 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 ZFAND6Q6FIF0 208 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 TOMM5Q8N4H5 51 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 OR4X1Q8NH49 305 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 DEDD2Q8WXF8 326 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 TMEM231Q9H6L2 316 aa13.82□□□□□ -0.2
HOXA3-203ENST00000518451 TMEM187Q14656 261 aa13.81□□□□□ -0.2
HOXA3-203ENST00000518451 C2orf83Q53S99 150 aa13.81□□□□□ -0.2
HOXA3-203ENST00000518451 RNASEH2CQ8TDP1 164 aaKnown RBP13.81□□□□□ -0.2
HOXA3-203ENST00000518451 TMEM230Q96A57 120 aa13.81□□□□□ -0.2
HOXA3-203ENST00000518451 UBQLN2Q9UHD9 624 aa13.81□□□□□ -0.2
HOXA3-203ENST00000518451 PUS1Q9Y606 427 aaKnown RBP eCLIP13.81□□□□□ -0.2
HOXA3-203ENST00000518451 A0A0B4J2A0 478 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 A0A1W2PS18 150 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 SLC25A4P12235 298 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 NPPCP23582 126 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 CCR6P51684 374 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 ETFRF1Q6IPR1 90 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 Q6ZWC4 215 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 LGI3Q8N145 548 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 STPG3Q8N7X2 389 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 ZNF414Q96IQ9 312 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 SHPKQ9UHJ6 478 aa13.8□□□□□ -0.2
HOXA3-203ENST00000518451 IGHV3-49A0A0A0MS15 119 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 KIR2DL5BA0A0G2JN68 375 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 KIR2DL5BA0A0G2JPC4 375 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 ZNF701M0R085 212 aaPredicted RBP13.79□□□□□ -0.2
HOXA3-203ENST00000518451 ODF3L2Q3SX64 289 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 KIR2DL5AQ8N109 375 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 SLC24A4Q8NFF2 622 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 KIR2DL5BQ8NHK3 375 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 NARS2Q96I59 477 aaKnown RBP13.79□□□□□ -0.2
HOXA3-203ENST00000518451 FNDC4Q9H6D8 234 aaPredicted RBP13.79□□□□□ -0.2
HOXA3-203ENST00000518451 VSIRQ9H7M9 311 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 TP53TG1Q9Y2A0 90 aa13.79□□□□□ -0.2
HOXA3-203ENST00000518451 IGHV3OR16-13A0A075B7E8 117 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 IGHV3-74A0A0B4J1X5 117 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 RPL11P62913 178 aaKnown RBP13.78□□□□□ -0.2
HOXA3-203ENST00000518451 KLF9Q13886 244 aaPredicted RBP13.78□□□□□ -0.2
HOXA3-203ENST00000518451 SMCO1Q147U7 214 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 MLANAQ16655 118 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 NMSQ5H8A3 153 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 FAM90A2PQ658T7 463 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 METTL26Q96S19 204 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 SLC25A21Q9BQT8 299 aaPredicted RBP13.78□□□□□ -0.2
HOXA3-203ENST00000518451 U3KQ87 197 aa13.78□□□□□ -0.2
HOXA3-203ENST00000518451 DNASE2O00115 360 aaPredicted RBP13.77□□□□□ -0.21
HOXA3-203ENST00000518451 TFPI2P48307 235 aa13.77□□□□□ -0.21
HOXA3-203ENST00000518451 ATP5IP56385 69 aaPredicted RBP13.77□□□□□ -0.21
HOXA3-203ENST00000518451 TMEM128Q5BJH2 165 aa13.77□□□□□ -0.21
HOXA3-203ENST00000518451 SPANXN2Q5MJ10 180 aa13.77□□□□□ -0.21
HOXA3-203ENST00000518451 Q8WTZ3 238 aa13.77□□□□□ -0.21
HOXA3-203ENST00000518451 OVOL2Q9BRP0 275 aa13.77□□□□□ -0.21
HOXA3-203ENST00000518451 ZFAND3Q9H8U3 227 aa13.77□□□□□ -0.21
HOXA3-203ENST00000518451 IGKV3-7A0A075B6H7 116 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 TRAV2A0A0B4J234 112 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 A0A1B0GU03 582 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 DUXBA0A1W2PPF3 345 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 SPRY2O43597 315 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 IFNA10P01566 189 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 NPY1RP25929 384 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 SUPT4H1P63272 117 aaKnown RBP13.76□□□□□ -0.21
HOXA3-203ENST00000518451 TNFRSF9Q07011 255 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 LYZL2Q7Z4W2 148 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 TMED4Q7Z7H5 227 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 GBGT1Q8N5D6 347 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 OR1S2Q8NGQ3 325 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 ST8SIA2Q92186 375 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 TRIM63Q969Q1 353 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 GRAMD2BQ96HH9 432 aa13.76□□□□□ -0.21
HOXA3-203ENST00000518451 V9GYH0 126 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms