RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 TCRBV4S1A1TA0A5B7 111 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 TNFRSF13BO14836 293 aaPredicted RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 ZNF324O75467 553 aaPredicted RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 TNFRSF1AP19438 455 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 BPIFB3P59826 476 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 FXYD3Q14802 87 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 ZNF124Q15973 351 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 MLANAQ16655 118 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 TDRG1Q3Y452 100 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 C22orf34Q6ZV56 151 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 ZNF329Q86UD4 541 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 DEFB124Q8NES8 71 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 OR4C13Q8NGP0 309 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 RND1Q92730 232 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 ST6GALNAC6Q969X2 333 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 SNRNP40Q96DI7 357 aaKnown RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 TBL2Q9Y4P3 447 aaKnown RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 RNF114Q9Y508 228 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 SMG1Q96Q15 3661 aaKnown RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 SPAARA0A1B0GVQ0 90 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 PEX7O00628 323 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 CD33P20138 364 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 CHRNB4P30926 498 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 PAX2Q02962 417 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 WT1-ASQ06250 92 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 DEFB108BQ8NET1 73 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 TMEM186Q96B77 213 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 FLYWCH2Q96CP2 140 aaKnown RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 RCHY1Q96PM5 261 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 FNDC4Q9H6D8 234 aaPredicted RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 ZNF355PQ9NSJ1 428 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 DCAF16Q9NXF7 216 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 PRRC2CQ9Y520 2896 aaKnown RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 BOD1L1Q8NFC6 3051 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 C17orf100A8MU93 164 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 E7EUB6 86 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 COX7A2P2O60397 106 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 ZNF253O75346 499 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 CRYABP02511 175 aaKnown RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 RPLP1P05386 114 aaKnown RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 SSBP2P81877 361 aaPredicted RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 GAGE1Q13065 139 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 KLF5Q13887 457 aaPredicted RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 MRGPRG-AS1Q2M3A8 158 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 C10orf113Q5VZT2 155 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 TMEM200BQ69YZ2 307 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 PATE2Q6UY27 113 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 C19orf35Q6ZS72 473 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 OR2T6Q8NHC8 308 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 FAM57AQ8TBR7 257 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 VN1R17PQ8TDU5 208 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 GRAMD2BQ96HH9 432 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 PAXXQ9BUH6 204 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 NRN1Q9NPD7 142 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 AMMECR1Q9Y4X0 333 aaPredicted RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 TRAV5A0A0B4J249 113 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 OR2J3O76001 311 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 APCSP02743 223 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 CRYGCP07315 174 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 MGST1P10620 155 aaKnown RBP5.38□□□□□ -1.55
CDH12-203ENST00000517378 SRIP30626 198 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 SUB1P53999 127 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDH12-203ENST00000517378 DLX6P56179 175 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 ADIPOQQ15848 244 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 TMEM108Q6UXF1 575 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 ATP5L2Q7Z4Y8 100 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 NIT1Q86X76 327 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 ATG101Q9BSB4 218 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 CHRDL1Q9BU40 450 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 WASHC3Q9Y3C0 194 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 KLF12Q9Y4X4 402 aa5.38□□□□□ -1.55
CDH12-203ENST00000517378 PTPRZ1P23471 2315 aaPredicted RBP5.37□□□□□ -1.55
CDH12-203ENST00000517378 A0A1B0GXF2 115 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 DIRC3C9JPN6 131 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 TMEM178BH3BS89 294 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 CCL3L1P16619 93 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 AMTP48728 403 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 PRRX1P54821 245 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 TCL1AP56279 114 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 FAM27E3Q08E93 113 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 SLAQ13239 276 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 ALKBH2Q6NS38 261 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 MRPL54Q6P161 138 aaKnown RBP5.37□□□□□ -1.55
CDH12-203ENST00000517378 ZNF705AQ6ZN79 300 aaPredicted RBP5.37□□□□□ -1.55
CDH12-203ENST00000517378 SSX8Q7RTT4 187 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 ZCCHC24Q8N2G6 241 aaKnown RBP5.37□□□□□ -1.55
CDH12-203ENST00000517378 STXBP6Q8NFX7 210 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 C18orf32Q8TCD1 76 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 TSKUQ8WUA8 353 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 PAM16Q9Y3D7 125 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 CACNA1HO95180 2353 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 TNCP24821 2201 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 PYYP10082 97 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 CCL8P80075 99 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 TBR1Q16650 682 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 RBMXL3Q8N7X1 1067 aaKnown RBP5.37□□□□□ -1.55
CDH12-203ENST00000517378 TRGV9Q99603 122 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 KAAG1Q9UBP8 84 aa5.37□□□□□ -1.55
CDH12-203ENST00000517378 SPENQ96T58 3664 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms