RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SVEP1Q4LDE5 3571 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CSMD1Q96PZ7 3565 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGLV11-55A0A075B6I3 123 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGKV1OR2-108A0A075B7D4 117 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CTXND1A0A1B0GTU2 59 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 A0A1B0GV50 99 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MAP1LC3B2A6NCE7 125 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SH2D7A6NKC9 451 aaPredicted RBP6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZFP92A6NM28 416 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 I3L2K1 104 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 I3L521 148 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CD5LO43866 347 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGHV3-48P01763 117 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGHV4-59P01825 116 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 AMY1AP04745 511 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 EGR2P11161 476 aaPredicted RBP6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 B2MP61769 119 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PRR20EP86478 221 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PRR20CP86479 221 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PRR20DP86480 221 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PRR20BP86481 221 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PRR20AP86496 221 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ECSCRQ19T08 205 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 AKIRIN2Q53H80 203 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 C9orf152Q5JTZ5 239 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FAM122CQ6P4D5 195 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SPSB3Q6PJ21 355 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 UQCC3Q6UW78 93 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 UNQ5815/PRO19632Q6UWF5 114 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 LCN15Q6UWW0 184 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SPNS3Q6ZMD2 512 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CYP2G1PQ6ZSU1 146 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RPP25LQ8N5L8 163 aaKnown RBP6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 STPG3Q8N7X2 389 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 OR5T1Q8NG75 326 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FAM110DQ8TAY7 271 aaPredicted RBP6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SFT2D1Q8WV19 159 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MBD3L1Q8WWY6 194 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MAP1LC3BQ9GZQ8 125 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SLC39A9Q9NUM3 307 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 THYN1Q9P016 225 aa6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MRPL36Q9P0J6 103 aaKnown RBP6.02□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGHV3-21A0A0B4J1V1 117 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TRAV1-1A0A0B4J248 108 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 A0A1W2PPV4 95 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TCRBV4S1A1TA0A5B7 111 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ANKRD34BA5PLL1 514 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 K7EIM0 57 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 YIF1AO95070 293 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 LINC00869P0C866 280 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 HIST1H1BP16401 226 aaKnown RBP6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SRP14P37108 136 aaKnown RBP6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IER3P46695 156 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CDC34P49427 236 aaPredicted RBP6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SELENOTP62341 195 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZNF726P1Q15940 193 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 GCSAMLQ5JQS6 135 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 Q6YL49 198 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SLC35E3Q7Z769 313 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TMEM116Q8NCL8 245 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 BPIFCQ8NFQ6 507 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RAB24Q969Q5 203 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZNF48Q96MX3 618 aaPredicted RBP6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FANCD2OSQ96PS1 177 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PBDC1Q9BVG4 233 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SLC25A22Q9H936 323 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TNFRSF19Q9NS68 423 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 VPREB3Q9UKI3 123 aa6.01□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGKV1D-37A0A075B6S9 117 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TRAV41A0A0B4J266 112 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 LINC01548A6NM66 108 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SEC14L6B5MCN3 397 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 G3V318 75 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 OR2J3O76001 311 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGHG2P01859 326 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FABP1P07148 127 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 HNF1AP20823 631 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 GATA2P23769 480 aaPredicted RBP6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CRIP2P52943 208 aaPredicted RBP6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MFAP4P55083 255 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RHOBP62745 196 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CCL20P78556 96 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 KRTAP1-1Q07627 177 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 GUK1Q16774 197 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SSX7Q7RTT5 188 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 OR4X1Q8NH49 305 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 NARS2Q96I59 477 aaKnown RBP6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FAM210AQ96ND0 272 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TRGV9Q99603 122 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 C19orf24Q9BVV8 132 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PRDM13Q9H4Q3 707 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TREM1Q9NP99 234 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 YAE1D1Q9NRH1 226 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZNF355PQ9NSJ1 428 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TLN2Q9Y4G6 2542 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 AKAP9Q99996 3911 aa6□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MYO9AB2RTY4 2548 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZNF469Q96JG9 3925 aaPredicted RBP5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TRAV30A0A087WSZ9 112 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 KRBOX1C9JBD0 128 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms