RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 KIR2DL2P43627 348 aaPredicted RBP7.92□□□□□ -1.14
VCAN-210ENST00000513960 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
VCAN-210ENST00000513960 SMIM21Q3B7S5 101 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 OR2V2Q96R30 315 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 OSTCQ9NRP0 149 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 ESDP10768 282 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 SRSF6Q13247 344 aaKnown RBP7.92□□□□□ -1.14
VCAN-210ENST00000513960 LINC00173Q6ZV60 143 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 C9orf106Q8NAJ2 232 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 ZNF835Q9Y2P0 537 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 AMMECR1Q9Y4X0 333 aaPredicted RBP7.92□□□□□ -1.14
VCAN-210ENST00000513960 PRRC2CQ9Y520 2896 aaKnown RBP7.91□□□□□ -1.14
VCAN-210ENST00000513960 SPAARA0A1B0GVQ0 90 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 GAGE12BA1L429 117 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 PRR33A8MZF0 331 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 AHRRA9YTQ3 701 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 IGKV3-15P01624 115 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 BRWD1-AS2P59051 145 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 ACP7Q6ZNF0 438 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 SPACA3Q8IXA5 215 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 TMEM116Q8NCL8 245 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 C1orf162Q8NEQ5 155 aaPredicted RBP7.91□□□□□ -1.14
VCAN-210ENST00000513960 RND1Q92730 232 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 COQ2Q96H96 371 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 CADP27708 2225 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 J3QR06 171 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 CECR9P0C854 216 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 ORM2P19652 201 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 DUTP33316 252 aaKnown RBP7.91□□□□□ -1.14
VCAN-210ENST00000513960 MZT1Q08AG7 82 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 C12orf54Q6X4T0 127 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 OR9G1Q8NH87 305 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 TNFRSF19Q9NS68 423 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 PROCRQ9UNN8 238 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 TNCP24821 2201 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 GGTLC3B5MD39 225 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 SAP30O75446 220 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 FTH1P19P0C7X4 201 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 APELAP0DMC3 54 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 TM4SF20Q53R12 229 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 WDR82Q6UXN9 313 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 BPIFA4PQ86YQ2 179 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 WDR31Q8NA23 367 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 OR2Z1Q8NG97 314 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 MAP1LC3CQ9BXW4 147 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 HES4Q9HCC6 221 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 OR51B2Q9Y5P1 312 aa7.91□□□□□ -1.14
VCAN-210ENST00000513960 IGHV3-21A0A0B4J1V1 117 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 PSG9Q00887 426 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 DEFB109BQ30KR1 87 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 NUP35Q8NFH5 326 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 OR8A1Q8NGG7 326 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 OR4S2Q8NH73 311 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 SNRNP40Q96DI7 357 aaKnown RBP7.9□□□□□ -1.14
VCAN-210ENST00000513960 WISP2O76076 250 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 HTR1DP28221 377 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 TBR1Q16650 682 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 PNKDQ8N490 385 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 ARFGEF3Q5TH69 2177 aa7.9□□□□□ -1.14
VCAN-210ENST00000513960 GOSR1O95249 250 aa7.9□□□□□ -1.15
VCAN-210ENST00000513960 BPIFB3P59826 476 aa7.9□□□□□ -1.15
VCAN-210ENST00000513960 NHLH1Q02575 133 aa7.9□□□□□ -1.15
VCAN-210ENST00000513960 VWC2Q2TAL6 325 aa7.9□□□□□ -1.15
VCAN-210ENST00000513960 AARDQ4LEZ3 155 aa7.9□□□□□ -1.15
VCAN-210ENST00000513960 ZNRF1Q8ND25 227 aa7.9□□□□□ -1.15
VCAN-210ENST00000513960 CNOT1A5YKK6 2376 aaKnown RBP7.9□□□□□ -1.15
VCAN-210ENST00000513960 ISLRO14498 428 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 C8orf88P0DMB2 117 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 ARF6P62330 175 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 C11orf53Q8IXP5 236 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 PPP1R35Q8TAP8 253 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 NEUROG1Q92886 237 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 H3BUT2 72 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 K7EP13 123 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 TOMM40O96008 361 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 HSPE1P61604 102 aaKnown RBP7.89□□□□□ -1.15
VCAN-210ENST00000513960 Q6ZR03 302 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 MUC15Q8N387 334 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 PRR7Q8TB68 274 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 FLYWCH2Q96CP2 140 aaKnown RBP7.89□□□□□ -1.15
VCAN-210ENST00000513960 PAXXQ9BUH6 204 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 SERTM2A0A1B0GWG4 89 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 C7orf71A4D174 169 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 OR5AL1P0C617 328 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 HIST1H1EP10412 219 aaKnown RBP7.89□□□□□ -1.15
VCAN-210ENST00000513960 AREGP15514 252 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 BHLHA15Q7RTS1 189 aaPredicted RBP7.89□□□□□ -1.15
VCAN-210ENST00000513960 Q8N7P7 452 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 PLSCR4Q9NRQ2 329 aa7.89□□□□□ -1.15
VCAN-210ENST00000513960 LOC389332A0A1B0GUA5 103 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 PRDX2P32119 198 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 GUSBP1Q15486 140 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 LRRC10Q5BKY1 277 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 FAM201AQ5SY85 155 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 COMMD5Q9GZQ3 224 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 PEF1Q9UBV8 284 aaKnown RBP7.88□□□□□ -1.15
VCAN-210ENST00000513960 P01737 135 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 ZADH2Q8N4Q0 377 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 CHODLQ9H9P2 273 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 F11RQ9Y624 299 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms