RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 OR4C45A6NMZ5 311 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 IGLV3-1P01715 115 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 KRT7P08729 469 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 MIFP14174 115 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 UGT2B7P16662 529 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 DDTP30046 118 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 KCNJ3P48549 501 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 ZNF137PP52743 207 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 CXCR4P61073 352 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 TNFAIP6P98066 277 aaPredicted RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 RHEBQ15382 184 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 RSU1Q15404 277 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 KRTAP19-6Q3LI70 58 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 KRTAP19-7Q3SYF9 63 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 C1orf137Q5JT78 98 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 C1orf194Q5T5A4 169 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 AADACL3Q5VUY0 350 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 GLT8D1Q68CQ7 371 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 LINC00322Q6ZN03 302 aaPredicted RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 DEFB128Q7Z7B8 93 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 IQCF2Q8IXL9 164 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 OR5L1Q8NGL2 311 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 RASSF5Q8WWW0 418 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 CMTM5Q96DZ9 223 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 PACRGQ96M98 296 aaPredicted RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 FAM103A1Q9BTL3 118 aaKnown RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 DCSTAMPQ9H295 470 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 AGPAT3Q9NRZ7 376 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 TP53TG1Q9Y2A0 90 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 CSMD3Q7Z407 3707 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 MYO18AQ92614 2054 aaKnown RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 TNRC18O15417 2968 aaPredicted RBP-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 ASXL3Q9C0F0 2248 aa-0.14□□□□□ -2.43
PDGFC-208ENST00000512711 LAMA1P25391 3075 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 ADGRB2O60241 1585 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 ITPR1Q14643 2758 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 FAM208BQ5VWN6 2430 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 CUBNO60494 3623 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 LRPPRCP42704 1394 aaKnown RBP-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 CACNA1CQ13936 2221 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 DNAH2Q9P225 4427 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 TRAV12-1A0A0B4J245 112 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 A0A0D9SG52 128 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 A0A0J9YY10 115 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 LOC100506127A0A0U1RQW1 187 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 TINCRA0A1B0GVN0 87 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 A0A1B0GX78 115 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 NUPR2A6NF83 97 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 TLCD2A6NGC4 264 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 FTCDNL1E5RQL4 147 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 F8VZ95 297 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 FAAHO00519 579 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 LYZL6O75951 148 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 PROSCO94903 275 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 BRI3O95415 125 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 TCL1BO95988 128 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 ORM1P02763 201 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 CD3DP04234 171 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 IL3P08700 152 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 BAALC-AS2P0C853 105 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 FAM228BP0C875 321 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 CCL1P22362 96 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 MAP2K4P45985 399 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 SPINT3P49223 89 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 CDC34P49427 236 aaPredicted RBP-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 MAP3K7CLP57077 242 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 GRK1Q15835 563 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 LRRC26Q2I0M4 334 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 DEFB113Q30KQ7 82 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 Q3ZCU0 254 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 KRTAP26-1Q6PEX3 210 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 DNM1P34Q6PK57 102 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 LINC00575Q6W349 94 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 Q6ZS92 163 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 COMMD7Q86VX2 200 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 C3orf56Q8N813 242 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 PFN4Q8NHR9 129 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 JOSD2Q8TAC2 188 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 C4orf3Q8WVX3 66 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 ROPN1LQ96C74 230 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 DHRS9Q9BPW9 319 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 DERL1Q9BUN8 251 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 COMMD5Q9GZQ3 224 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 CHMP5Q9NZZ3 219 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 PRRC2CQ9Y520 2896 aaKnown RBP-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 DNAH5Q8TE73 4624 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 PCNX1Q96RV3 2341 aa-0.15□□□□□ -2.43
PDGFC-208ENST00000512711 FLNBO75369 2602 aaKnown RBP-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 CEP295Q9C0D2 2601 aa-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 DMXL2Q8TDJ6 3036 aa-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 FREM3P0C091 2139 aa-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 APOBP04114 4563 aaKnown RBP-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 TEX15Q9BXT5 2789 aa-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 ITPR3Q14573 2671 aa-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 ZFHX3Q15911 3703 aa-0.16□□□□□ -2.43
PDGFC-208ENST00000512711 TRBV6-4A0A1B0GX49 114 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 DISC1C4P0D8 188 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms