RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 IGKV3-7A0A075B6H7 116 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 TRAV9-1A0A075B6T8 112 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 ATXN7O15265 892 aaPredicted RBP11.24□□□□□ -0.61
RBM47-207ENST00000510871 LINC00305Q7Z4B0 112 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 CACNA1HO95180 2353 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 MBD3L4A6NDZ8 208 aaPredicted RBP11.24□□□□□ -0.61
RBM47-207ENST00000510871 MBD3L3A6NE82 208 aaPredicted RBP11.24□□□□□ -0.61
RBM47-207ENST00000510871 MBD3L5A6NJ08 208 aaPredicted RBP11.24□□□□□ -0.61
RBM47-207ENST00000510871 PAX2Q02962 417 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 OR8A1Q8NGG7 326 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 MBD3L2Q8NHZ7 208 aaPredicted RBP11.24□□□□□ -0.61
RBM47-207ENST00000510871 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
RBM47-207ENST00000510871 TCF23Q7RTU1 214 aa11.24□□□□□ -0.61
RBM47-207ENST00000510871 AMMECR1LQ6DCA0 310 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 GEMIN7Q9H840 131 aaKnown RBP11.23□□□□□ -0.61
RBM47-207ENST00000510871 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 ROS1P08922 2347 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.23□□□□□ -0.61
RBM47-207ENST00000510871 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 DPM3Q9P2X0 92 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 NPIPB11E5RHQ5 1161 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 J3KRW8 73 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 PLA2G2CQ5R387 149 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 RNASEH2CQ8TDP1 164 aaKnown RBP11.23□□□□□ -0.61
RBM47-207ENST00000510871 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
RBM47-207ENST00000510871 WIPF3A6NGB9 483 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 COQ2Q96H96 371 aa11.23□□□□□ -0.61
RBM47-207ENST00000510871 EAF1Q96JC9 268 aaPredicted RBP11.23□□□□□ -0.61
RBM47-207ENST00000510871 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 IGKV3-15P01624 115 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 CACNG8Q8WXS5 425 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
RBM47-207ENST00000510871 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 ZNF256Q9Y2P7 627 aaPredicted RBP11.22□□□□□ -0.61
RBM47-207ENST00000510871 FAM90A9PA6NNJ1 464 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 RNF138Q8WVD3 245 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 TMEM70Q9BUB7 260 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 HLA-DRB1P01911 266 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 SLAQ13239 276 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 TMEM144Q7Z5S9 345 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 RAXQ9Y2V3 346 aa11.22□□□□□ -0.61
RBM47-207ENST00000510871 ZNF503-AS2A6NEH8 195 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 PSG1P11464 419 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 PRB3Q04118 309 aaPredicted RBP11.21□□□□□ -0.61
RBM47-207ENST00000510871 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 SSBP3Q9BWW4 388 aaPredicted RBP11.21□□□□□ -0.61
RBM47-207ENST00000510871 IGKV1-6A0A0C4DH72 117 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 HOXA4Q00056 320 aaPredicted RBP11.21□□□□□ -0.61
RBM47-207ENST00000510871 Q6ZS92 163 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 VKORC1Q9BQB6 163 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 FER1L5A0AVI2 2057 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 IGLV3-1P01715 115 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 ESPL1Q14674 2120 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 TMEM177Q53S58 311 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.61
RBM47-207ENST00000510871 KIAA2026Q5HYC2 2103 aa11.21□□□□□ -0.62
RBM47-207ENST00000510871 A0A0G2JRQ6 117 aa11.21□□□□□ -0.62
RBM47-207ENST00000510871 A0A1B0GWB2 263 aa11.21□□□□□ -0.62
RBM47-207ENST00000510871 LYNX1G3V0Z9 82 aa11.21□□□□□ -0.62
RBM47-207ENST00000510871 LYNX1P0DP58 116 aa11.21□□□□□ -0.62
RBM47-207ENST00000510871 MAS1LP35410 378 aa11.21□□□□□ -0.62
RBM47-207ENST00000510871 NEU4Q8WWR8 484 aaPredicted RBP11.21□□□□□ -0.62
RBM47-207ENST00000510871 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.62
RBM47-207ENST00000510871 F5H697 171 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 DKK1O94907 266 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 PRSS1P07477 247 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 ZNF474Q6S9Z5 364 aaPredicted RBP11.2□□□□□ -0.62
RBM47-207ENST00000510871 PMCHL2Q9BQD1 86 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 VCX2Q9H322 139 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 GAGE12BA1L429 117 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 NMUP48645 174 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 TBR1Q16650 682 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 ACTL10Q5JWF8 245 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 DOCK7Q96N67 2140 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 TMEM133Q9H2Q1 129 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
RBM47-207ENST00000510871 IL4P05112 153 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 LOXL3P58215 753 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 OR13C6PQ8NH95 151 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 KIAA1549LQ6ZVL6 1849 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 IGKV1D-33P01593 117 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 IGKV1-33P01594 117 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 FAM19A2Q8N3H0 131 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 PGLYRP4Q96LB8 373 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 LIME1Q9H400 295 aa11.2□□□□□ -0.62
RBM47-207ENST00000510871 HEATR1Q9H583 2144 aaKnown RBP11.2□□□□□ -0.62
RBM47-207ENST00000510871 C1QTNF9P0C862 333 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms