RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ID3Q02535 119 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 TRGV8A0A0C4DH27 118 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 ZAR1Q86SH2 424 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 TMEM74BQ9NUR3 256 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 FNDC1Q4ZHG4 1894 aaPredicted RBP7.08□□□□□ -1.28
HTT-208ENST00000510626 SHISA9B4DS77 424 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 REG1BP48304 166 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 COA6Q5JTJ3 125 aaKnown RBP7.08□□□□□ -1.28
HTT-208ENST00000510626 CLEC7AQ9BXN2 247 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 R4GN57 208 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 PRKNO60260 465 aaPredicted RBP7.08□□□□□ -1.28
HTT-208ENST00000510626 SLC25A28Q96A46 364 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 FAM60AQ9NP50 221 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 ANAPC1Q9H1A4 1944 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 SSBP2P81877 361 aaPredicted RBP7.07□□□□□ -1.28
HTT-208ENST00000510626 RTP5Q14D33 572 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 EAF1Q96JC9 268 aaPredicted RBP7.07□□□□□ -1.28
HTT-208ENST00000510626 KLF12Q9Y4X4 402 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 C5orf67F2Z3F1 127 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 IGHV2-5P01817 119 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 RNF115Q9Y4L5 304 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 M0R2P5 195 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 SLC25A53Q5H9E4 307 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 RPRMLQ8N4K4 120 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 YPEL1O60688 119 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 YPEL2Q96QA6 119 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 SRSF8Q9BRL6 282 aaKnown RBP7.07□□□□□ -1.28
HTT-208ENST00000510626 MLNRO43193 412 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 CD300EQ496F6 205 aaPredicted RBP7.07□□□□□ -1.28
HTT-208ENST00000510626 WFDC1Q9HC57 220 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 LOXL3P58215 753 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 ZNF562Q6V9R5 426 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 RFLNBQ8N5W9 214 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 SLC25A39Q9BZJ4 359 aaPredicted RBP7.07□□□□□ -1.28
HTT-208ENST00000510626 R3HDMLQ9H3Y0 253 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 LPAL2Q16609 132 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 COQ2Q96H96 371 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 FNDC4Q9H6D8 234 aaPredicted RBP7.07□□□□□ -1.28
HTT-208ENST00000510626 IGHG4P01861 327 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 GUSBP11Q6P575 273 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 WDR82Q6UXN9 313 aa7.07□□□□□ -1.28
HTT-208ENST00000510626 FAM90A2PQ658T7 463 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 IGHV1-45A0A0A0MS14 117 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 HRKO00198 91 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 IFI27P40305 119 aaPredicted RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 ACP7Q6ZNF0 438 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 Q9H3A6 140 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 ERG28Q9UKR5 140 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 CCL2P13500 99 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 SSBP3Q9BWW4 388 aaPredicted RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 RLFQ13129 1914 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 KIF26AQ9ULI4 1882 aaPredicted RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 FAM157AC9JC47 383 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 TMSB15BA0A087X1C1 80 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 IGHV5-10-1A0A0J9YXX1 117 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 SPINK14Q6IE38 97 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 Q6ZVH6 145 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 LOXL4Q96JB6 756 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 ZNF385AQ96PM9 386 aaKnown RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 PEBP1P30086 187 aaKnown RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 KIAA1644Q3SXP7 199 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 FAM159AQ6UWV7 190 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 FGF11Q92914 225 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 SLC25A15Q9Y619 301 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 IGHV1OR15-9A0A0B4J2B8 117 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 MAGEA5P43359 124 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 TDHQ8IZJ6 230 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 PLAUP00749 431 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 PATE4P0C8F1 98 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 BEX4Q9NWD9 120 aaPredicted RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 BDP1A6H8Y1 2624 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 FABP5P3A8MUU1 101 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 RSPO3Q9BXY4 272 aaPredicted RBP7.06□□□□□ -1.28
HTT-208ENST00000510626 NTN1O95631 604 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 SSTR5P35346 364 aa7.06□□□□□ -1.28
HTT-208ENST00000510626 GGTLC1Q9BX51 225 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 TRBV6-6A0A0A6YYG2 114 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 H3BMM0 161 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 TEX45Q8NA69 505 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 HIVEP2P31629 2446 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 HCP5Q6MZN7 132 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 TRGV9Q99603 122 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 SPXQ9BT56 116 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 IGLV3-32A0A0A0MS00 114 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 GGTLC3B5MD39 225 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 ADMP35318 185 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 REPIN1Q9BWE0 567 aaKnown RBP7.05□□□□□ -1.28
HTT-208ENST00000510626 A0A0J9YW62 118 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 TRBV7-9A0A0J9YWB2 115 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 CENPVL1A0A0U1RR11 272 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 C15orf61A6NNL5 157 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 PPDPFLQ8WWR9 84 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 RNF5Q99942 180 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 TTTY12Q9BZ98 90 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 LINC00312Q9Y6C7 94 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 CGAP01215 116 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms