RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 PAFAH1B2P68402 229 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 GLYATL2Q8WU03 294 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 LINC00476Q8WZB0 136 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 RTBDNQ9BSG5 229 aaPredicted RBP9.19□□□□□ -0.94
PDPN-208ENST00000509009 PDCD10Q9BUL8 212 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 TMEM222Q9H0R3 208 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 ZFAND3Q9H8U3 227 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 HYDINQ4G0P3 5121 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 DNASE2O00115 360 aaPredicted RBP9.18□□□□□ -0.94
PDPN-208ENST00000509009 CORTO00230 105 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 NPPCP23582 126 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 SPCS3P61009 180 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 SSBP1Q04837 148 aaKnown RBP9.18□□□□□ -0.94
PDPN-208ENST00000509009 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 AARDQ4LEZ3 155 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 OR4X1Q8NH49 305 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 ENY2Q9NPA8 101 aa9.18□□□□□ -0.94
PDPN-208ENST00000509009 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.18□□□□□ -0.94
PDPN-208ENST00000509009 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
PDPN-208ENST00000509009 NUPR2A6NF83 97 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 RGS5O15539 181 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 CLN5O75503 358 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 OR5AC1P0C628 307 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 HOXA1P49639 335 aaPredicted RBP9.17□□□□□ -0.94
PDPN-208ENST00000509009 MRPS10P82664 201 aaKnown RBP9.17□□□□□ -0.94
PDPN-208ENST00000509009 MEF2DQ14814 521 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 SPCS2Q15005 226 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 FAAP20Q6NZ36 180 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 FAM219AQ8IW50 185 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 SELENOHQ8IZQ5 122 aaKnown RBP9.17□□□□□ -0.94
PDPN-208ENST00000509009 TMEM217Q8N7C4 229 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 OR52E5Q8NH55 327 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 LHFPL5Q8TAF8 219 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 GATAD1Q8WUU5 269 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 RARRES2Q99969 163 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 GPR132Q9UNW8 380 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
PDPN-208ENST00000509009 TRAV2A0A0B4J234 112 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 DISC1C4P0D8 188 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 LY6G6CO95867 125 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 IGKV1-17P01599 117 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 CRYBB3P26998 211 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 OPRK1P41145 380 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 DEFB131AP59861 70 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
PDPN-208ENST00000509009 DHODHQ02127 395 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 SURF2Q15527 256 aaPredicted RBP9.16□□□□□ -0.94
PDPN-208ENST00000509009 GPR141Q7Z602 305 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 FAM24BQ8N5W8 94 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 RNASE11Q8TAA1 199 aaKnown RBP9.16□□□□□ -0.94
PDPN-208ENST00000509009 SMIM4Q8WVI0 70 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 TMEM230Q96A57 120 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 MRPS26Q9BYN8 205 aaKnown RBP9.16□□□□□ -0.94
PDPN-208ENST00000509009 NAA60Q9H7X0 242 aa9.16□□□□□ -0.94
PDPN-208ENST00000509009 C14orf166Q9Y224 244 aaKnown RBP9.16□□□□□ -0.94
PDPN-208ENST00000509009 KLK5Q9Y337 293 aaPredicted RBP9.16□□□□□ -0.94
PDPN-208ENST00000509009 TRAV30A0A087WSZ9 112 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 A0A1W2PS18 150 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 CTDSPLO15194 276 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 HTR2BP41595 481 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 TIGITQ495A1 244 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 LEMD1Q68G75 181 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 OR4C16Q8NGL9 310 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
PDPN-208ENST00000509009 RBPMSQ93062 196 aaKnown RBP9.15□□□□□ -0.94
PDPN-208ENST00000509009 DIRAS2Q96HU8 199 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 TMEM231Q9H6L2 316 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 HEYLQ9NQ87 328 aaPredicted RBP9.15□□□□□ -0.94
PDPN-208ENST00000509009 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.94
PDPN-208ENST00000509009 CRYM-AS1A6NIL9 109 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 K7EQG2 157 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 AKAIN1P0CW23 69 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 RBMS2Q15434 407 aaKnown RBP9.14□□□□□ -0.95
PDPN-208ENST00000509009 C2orf83Q53S99 150 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 PRSS54Q6PEW0 395 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
PDPN-208ENST00000509009 OR51S1Q8NGJ8 323 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 METTL26Q96S19 204 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 RABL2AQ9UBK7 228 aaPredicted RBP9.14□□□□□ -0.95
PDPN-208ENST00000509009 CACNG5Q9UF02 275 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 RABAC1Q9UI14 185 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 RABL2BQ9UNT1 228 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 U3KQE9 123 aa9.14□□□□□ -0.95
PDPN-208ENST00000509009 RPS10-NUDT3A0A1W2PQS6 291 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 CA1P00915 261 aaPredicted RBP9.13□□□□□ -0.95
PDPN-208ENST00000509009 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
PDPN-208ENST00000509009 P2RY1P47900 373 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 NANOS2P60321 138 aaKnown RBP9.13□□□□□ -0.95
PDPN-208ENST00000509009 IL18Q14116 193 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 TMEM187Q14656 261 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 TMEM268Q5VZI3 342 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 DYNC2LI1Q8TCX1 351 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 RNASEH2CQ8TDP1 164 aaKnown RBP9.13□□□□□ -0.95
PDPN-208ENST00000509009 TMEM170AQ8WVE7 144 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 PRRT1Q99946 306 aa9.13□□□□□ -0.95
PDPN-208ENST00000509009 ANKRD20A5PA0PJZ0 165 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms