RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SDK2Q58EX2 2172 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 TRAV34A0A0B4J273 112 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 TEX50A0A1B0GTY4 177 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 A0A1B0GW15 77 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 TCRBV4S1A1TA0A5B7 111 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 hADV38S2A0JD32 116 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 HIGD1CA8MV81 97 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 NDUFB8O95169 186 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 P01737 135 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGHV3-13P01766 116 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 CECR9P0C854 216 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 SAA2P0DJI9 122 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 CGB3P0DN86 165 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 CGB7P0DN87 165 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 PLA2G5P39877 138 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 HINT1P49773 126 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 GNG10P50151 68 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 RPL8P62917 257 aaKnown RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 SLC35B1P78383 322 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 SLAQ13239 276 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 GUSBP1Q15486 140 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 VAMP3Q15836 100 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 TNXAQ16473 311 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 Q56UQ5 140 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 CT45A1Q5HYN5 189 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 PSMG4Q5JS54 123 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 FAM53AQ6NSI3 398 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 FAM71F2Q6NXP2 309 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 SLC25A48Q6ZT89 311 aaKnown RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF329Q86UD4 541 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 LYG1Q8N1E2 194 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 FAM19A2Q8N3H0 131 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 RBMXL3Q8N7X1 1067 aaKnown RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 CNEP1R1Q8N9A8 125 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 NUP35Q8NFH5 326 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 NUDT10Q8NFP7 164 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR10X1Q8NGY0 326 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 CT45A3Q8NHU0 189 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 MAFAQ8NHW3 353 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 FAM222BQ8WU58 562 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF503Q96F45 646 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 NUDT11Q96G61 164 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 FAM167A-AS1Q96KT0 104 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 GPR82Q96P67 336 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 DCTN5Q9BTE1 182 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 SLC25A2Q9BXI2 301 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 MAP1LC3CQ9BXW4 147 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 RPP21Q9H633 154 aaKnown RBP4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 PLSCR4Q9NRQ2 329 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF355PQ9NSJ1 428 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 RNF7Q9UBF6 113 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 PROCRQ9UNN8 238 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 RNF24Q9Y225 148 aa4.04□□□□□ -1.76
HMGB3P16-201ENST00000508037 CHD7Q9P2D1 2997 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 BRWD1Q9NSI6 2320 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 A0A1B0GXF2 115 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR4C46A6NHA9 309 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 C2orf70A6NJV1 201 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 AHRRA9YTQ3 701 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 PATE3B3GLJ2 98 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 C22orf46C9J442 243 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 SYS1-DBNDD2H3BUS1 97 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 CORTO00230 105 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 CHEK1O14757 476 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 CCL25O15444 150 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 AGFG2O95081 481 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 LEPROTL1O95214 131 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 LHBP01229 141 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 PPBPP02775 128 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 SLC25A5P05141 298 aaKnown RBP4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGLL1P15814 213 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 GLRXP35754 106 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF134P52741 427 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 LINC00205P59089 165 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 RHOGP84095 191 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 HIST1H1AQ02539 215 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 MEF2CQ06413 473 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 C17orf58Q2M2W7 97 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 TMEM177Q53S58 311 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 RBPMS2Q6ZRY4 209 aaKnown RBP4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 BHLHA15Q7RTS1 189 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 TMPRSS7Q7RTY8 843 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 S100A7AQ86SG5 101 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 C8orf31Q8N9H6 132 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 THAP8Q8NA92 274 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 C5orf17Q8NAS9 161 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 TMEM167AQ8TBQ9 72 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 SNRNP40Q96DI7 357 aaKnown RBP4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 NDFIP1Q9BT67 221 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 NDUFA4L2Q9NRX3 87 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 DKK4Q9UBT3 224 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 RPUSD1Q9UJJ7 312 aaKnown RBP4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 EPDR1Q9UM22 224 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 KLF12Q9Y4X4 402 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 LINC00312Q9Y6C7 94 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 R4GN57 208 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF407Q9C0G0 2248 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 ARHGAP21Q5T5U3 1957 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 PI4KAP42356 2102 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms