RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 TMEM30BQ3MIR4 351 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 C1orf194Q5T5A4 169 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 MRPL54Q6P161 138 aaKnown RBP6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 IGF2-ASQ6U949 168 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 TGIF2LXQ8IUE1 241 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 BEND2Q8NDZ0 799 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 CACNG8Q8WXS5 425 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 RITA1Q96K30 269 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 C2orf88Q9BSF0 95 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 GNB1LQ9BYB4 327 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 FNDC4Q9H6D8 234 aaPredicted RBP6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 ARL2-SNX15V9GYD0 113 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 ZFHX2Q9C0A1 2572 aaPredicted RBP6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 ZZEF1O43149 2961 aa6.17□□□□□ -1.42
PPARGC1A-204ENST00000506055 IGHV3-72A0A0B4J1Y9 119 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 TRAV34A0A0B4J273 112 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 A0A1W2PRE2 83 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 TMEM178BH3BS89 294 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 EREGO14944 169 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 NDUFB3O43676 98 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 PLAUP00749 431 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 CDKN1AP38936 164 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 PPOXP50336 477 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 RANP62826 216 aaKnown RBP6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 LBHQ53QV2 105 aaPredicted RBP6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 TMEM177Q53S58 311 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 C10orf113Q5VZT2 155 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 PNKDQ8N490 385 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 VN1R17PQ8TDU5 208 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 FAM168AQ92567 244 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 FAM167A-AS1Q96KT0 104 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 ATG101Q9BSB4 218 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 SSBP3Q9BWW4 388 aaPredicted RBP6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 ZNF430Q9H8G1 570 aaPredicted RBP6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 GNB4Q9HAV0 340 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 ZNF355PQ9NSJ1 428 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 CGB1A6NKQ9 187 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 ISLRO14498 428 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 PRRG2O14669 202 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 SLC25A17O43808 307 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 IGLV2-8P01709 118 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 PRB3Q04118 309 aaPredicted RBP6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 LRRC10Q5BKY1 277 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 SIGLECL1Q8N7X8 197 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 OSTCQ9NRP0 149 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 TPSG1Q9NRR2 321 aa6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 AMMECR1Q9Y4X0 333 aaPredicted RBP6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 ANKRD11Q6UB99 2663 aaPredicted RBP6.16□□□□□ -1.42
PPARGC1A-204ENST00000506055 A0A1W2PN81 502 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 PSMB11A5LHX3 300 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 THBDP07204 575 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 ORM2P19652 201 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 SUB1P53999 127 aaKnown RBP eCLIP6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 DLX1P56177 255 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 RPL19P84098 196 aaKnown RBP6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 Q0VG73 95 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 HCP5Q6MZN7 132 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 PATE2Q6UY27 113 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 ZNF705AQ6ZN79 300 aaPredicted RBP6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 VSTM2AQ8TAG5 236 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 ABHD17AQ96GS6 310 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 SGK494Q96LW2 274 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 IGF2BP2-AS1Q96M15 143 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 PAXXQ9BUH6 204 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 MRPL32Q9BYC8 188 aaKnown RBP6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 CUL9Q8IWT3 2517 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 LRBAP50851 2863 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 RELNP78509 3460 aa6.15□□□□□ -1.42
PPARGC1A-204ENST00000506055 TRBV9A0A0B4J1U6 114 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 IGLV2-23P01705 113 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 SSTP61278 116 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 RUSC1-AS1Q66K80 236 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 PRR27Q6MZM9 219 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 WDR73Q6P4I2 378 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 TMEM136Q6ZRR5 245 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 LINC00305Q7Z4B0 112 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 PDPNQ86YL7 162 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 TMEM167AQ8TBQ9 72 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 BLNKQ8WV28 456 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 TMEM186Q96B77 213 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 SNHG12Q9BXW3 62 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 WASHC3Q9Y3C0 194 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.43
PPARGC1A-204ENST00000506055 IGHV3-21A0A0B4J1V1 117 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 SMIM27A0A1W2PRY6 76 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 TCRBV4S1A1TA0A5B7 111 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 ZNF253O75346 499 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 ESDP10768 282 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 KRTDAPP60985 99 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 TPTE2P1Q5T6R2 138 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 C19orf35Q6ZS72 473 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 RCHY1Q96PM5 261 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 CTSZQ9UBR2 303 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 CDC42EP3Q9UKI2 254 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 IGKV1D-37A0A075B6S9 117 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 MOSP00540 346 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 MT-ND6P03923 174 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 AMY1AP04745 511 aa6.14□□□□□ -1.43
PPARGC1A-204ENST00000506055 GPX1P07203 203 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms