RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 ZP3P21754 424 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 GPR183P32249 361 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 TAS2R30P59541 319 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 RUNX1Q01196 453 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 MLANAQ16655 118 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 BSXQ3C1V8 233 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 OR8G2PQ6IF36 304 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 OR10P1Q8NGE3 313 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 THAP6Q8TBB0 222 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 PPP1R1CQ8WVI7 109 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 RAX2Q96IS3 184 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 SLC35E1Q96K37 410 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 ZNF436Q9C0F3 470 aaPredicted RBP6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 GAR1Q9NY12 217 aaKnown RBP6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 TNCP24821 2201 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 hCG_2014768A0A024R1R8 64 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 SMCO3A2RU48 225 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 FAM24AA6NFZ4 105 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 C15orf62A8K5M9 175 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 E5RGE8 158 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 GGCTO75223 188 aaKnown RBP6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 DEDDO75618 318 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 TSPAN15O95858 294 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 TRBV12-3P01733 135 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 METTL15P1P0C7V9 234 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 SLC25A4P12235 298 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 SLURP1P55000 103 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 CD69Q07108 199 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 FGL1Q08830 312 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 IL15RAQ13261 267 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 KLK9Q2XQG4 91 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 OR11H7Q8NGC8 314 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 ZNF502Q8TBZ5 544 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 DCUN1D4Q92564 292 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 BSCL2Q96G97 398 aaPredicted RBP6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 ACY3Q96HD9 319 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 CCDC140Q96MF4 163 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 OR4C12Q96R67 309 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 TXN2Q99757 166 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 KLK9Q9UKQ9 250 aa6.34□□□□□ -1.39
LIMCH1-206ENST00000505705 TRAV30A0A087WSZ9 112 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 IGHV3-35A0A0C4DH35 117 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 ZNF320A2RRD8 509 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 TGOLN2O43493 480 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 CLN5O75503 358 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 YIF1AO95070 293 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 OR2C1O95371 312 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 MPC2O95563 127 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM50AO95807 157 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 GIPP09681 153 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 HOXD3P31249 432 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 GPX4P36969 197 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 NUP62P37198 522 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 P2RY1P47900 373 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 RND2P52198 227 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 PAX9P55771 341 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 AKR1C1Q04828 323 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 RELQ04864 619 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 FAM106AQ4KMX7 169 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 SPSB3Q6PJ21 355 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 Q6ZNX1 250 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 STX12Q86Y82 276 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 LILRB2Q8N423 598 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM217Q8N7C4 229 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 OR4X1Q8NH49 305 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM170AQ8WVE7 144 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 ASB13Q8WXK3 278 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 CACNG8Q8WXS5 425 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 NPIPB3Q92617 1050 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 WDR89Q96FK6 387 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 SLC25A31Q9H0C2 315 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 FNDC4Q9H6D8 234 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 LYRM2Q9NU23 88 aaPredicted RBP6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 OR5AC2Q9NZP5 309 aa6.33□□□□□ -1.4
LIMCH1-206ENST00000505705 ZFP92A6NM28 416 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 BMPR1BO00238 502 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 OVOL1O14753 267 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 CST7O76096 145 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 SCAF4O95104 1147 aaKnown RBP6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 SULT1A1P50225 295 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 SYNJ2BPP57105 145 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 RAP2BP61225 183 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 HBG1P69891 147 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 HBG2P69892 147 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 PVRIGQ6DKI7 326 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 PRSS54Q6PEW0 395 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM14EPQ6UXP3 125 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM252Q8N6L7 170 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 DLX4Q92988 240 aaPredicted RBP6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 ATP6V0BQ99437 205 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 ELOVL1Q9BW60 279 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 MBD2Q9UBB5 411 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 PEMTQ9UBM1 199 aa6.32□□□□□ -1.4
LIMCH1-206ENST00000505705 ATRQ13535 2644 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 H0YIZ8 118 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 CCNKO75909 580 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 CTSGP08311 255 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 OR10J1P30954 320 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 S100A11P31949 105 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms