RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CTDSPLO15194 276 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 JTBO76095 146 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 OR5AC1P0C628 307 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 RPL35AP18077 110 aaKnown RBP8.87□□□□□ -0.99
MED28-203ENST00000503945 NPPCP23582 126 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 RPL5P46777 297 aaKnown RBP8.87□□□□□ -0.99
MED28-203ENST00000503945 TFPI2P48307 235 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 ZNF600Q6ZNG1 722 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 Q6ZRM9 215 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 WFDC3Q8IUB2 231 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 GBGT1Q8N5D6 347 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 OR52E5Q8NH55 327 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 SMIM4Q8WVI0 70 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 TMEM230Q96A57 120 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 PRRT1Q99946 306 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 BCL7BQ9BQE9 202 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 NAA60Q9H7X0 242 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 CACFD1Q9UGQ2 172 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 RSL24D1Q9UHA3 163 aaKnown RBP8.87□□□□□ -0.99
MED28-203ENST00000503945 SCP2D1Q9UJQ7 156 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 GPR132Q9UNW8 380 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 IGHV3OR16-13A0A075B7E8 117 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 TRAV30A0A087WSZ9 112 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 IGHV3-74A0A0B4J1X5 117 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 A0A1W2PS18 150 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 FABP12A6NFH5 140 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 NOL3O60936 208 aaKnown RBP8.86□□□□□ -0.99
MED28-203ENST00000503945 RNASE2P10153 161 aaKnown RBP8.86□□□□□ -0.99
MED28-203ENST00000503945 OPRK1P41145 380 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 HTR2BP41595 481 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 MLANAQ16655 118 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 ODF3L2Q3SX64 289 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 PVRIGQ6DKI7 326 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 FAAP20Q6NZ36 180 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 TCF24Q7RTU0 167 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 APRG1Q8IVJ8 170 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 SELENOHQ8IZQ5 122 aaKnown RBP8.86□□□□□ -0.99
MED28-203ENST00000503945 OR4X1Q8NH49 305 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 DYNC2LI1Q8TCX1 351 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 RBPMSQ93062 196 aaKnown RBP8.86□□□□□ -0.99
MED28-203ENST00000503945 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 TMEM231Q9H6L2 316 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 MAP6D1Q9H9H5 199 aa8.86□□□□□ -0.99
MED28-203ENST00000503945 HEYLQ9NQ87 328 aaPredicted RBP8.86□□□□□ -0.99
MED28-203ENST00000503945 PUS1Q9Y606 427 aaKnown RBP eCLIP8.86□□□□□ -0.99
MED28-203ENST00000503945 RPS10-NUDT3A0A1W2PQS6 291 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 CLN5O75503 358 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 DFFBO76075 338 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 TMEM268Q5VZI3 342 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 FAM90A2PQ658T7 463 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 OR51S1Q8NGJ8 323 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 GPR146Q96CH1 333 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 RNF183Q96D59 192 aa8.85□□□□□ -0.99
MED28-203ENST00000503945 CCDC59Q9P031 241 aaKnown RBP8.85□□□□□ -0.99
MED28-203ENST00000503945 A0A0J9YWU9 116 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 CRYM-AS1A6NIL9 109 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 CEBPZOSA8MTT3 80 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 MPTX1A8MV57 137 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 GSTZ1O43708 216 aaPredicted RBP8.84□□□□□ -0.99
MED28-203ENST00000503945 TNFSF8P32971 234 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 TNFRSF9Q07011 255 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 DEFB135Q30KP9 77 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 ETFRF1Q6IPR1 90 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 NOXA1Q86UR1 476 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 LILRB2Q8N423 598 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 TMEM217Q8N7C4 229 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 OR4C16Q8NGL9 310 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 ST8SIA2Q92186 375 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 NARS2Q96I59 477 aaKnown RBP8.84□□□□□ -0.99
MED28-203ENST00000503945 ZNF414Q96IQ9 312 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 METTL26Q96S19 204 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 MS4A6AQ9H2W1 248 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 VSIRQ9H7M9 311 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 MCUBQ9NWR8 336 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 TMEM56-RWDD3S4R434 201 aa8.84□□□□□ -0.99
MED28-203ENST00000503945 IGHV3-66A0A0C4DH42 116 aa8.83□□□□□ -1
MED28-203ENST00000503945 A0A0G2JRQ6 117 aa8.83□□□□□ -1
MED28-203ENST00000503945 A0A1B0GU03 582 aa8.83□□□□□ -1
MED28-203ENST00000503945 ANKRD20A5PA0PJZ0 165 aa8.83□□□□□ -1
MED28-203ENST00000503945 CXorf65A6NEN9 183 aa8.83□□□□□ -1
MED28-203ENST00000503945 APOHP02749 345 aaPredicted RBP8.83□□□□□ -1
MED28-203ENST00000503945 AKR1C4P17516 323 aa8.83□□□□□ -1
MED28-203ENST00000503945 AARDQ4LEZ3 155 aa8.83□□□□□ -1
MED28-203ENST00000503945 C2orf83Q53S99 150 aa8.83□□□□□ -1
MED28-203ENST00000503945 LYG2Q86SG7 212 aa8.83□□□□□ -1
MED28-203ENST00000503945 LHFPL5Q8TAF8 219 aa8.83□□□□□ -1
MED28-203ENST00000503945 RNASEH2CQ8TDP1 164 aaKnown RBP8.83□□□□□ -1
MED28-203ENST00000503945 Q8WTZ3 238 aa8.83□□□□□ -1
MED28-203ENST00000503945 GRAMD2BQ96HH9 432 aa8.83□□□□□ -1
MED28-203ENST00000503945 FNDC4Q9H6D8 234 aaPredicted RBP8.83□□□□□ -1
MED28-203ENST00000503945 CACNG5Q9UF02 275 aa8.83□□□□□ -1
MED28-203ENST00000503945 PIGBOS1A0A0B4J2F0 54 aa8.82□□□□□ -1
MED28-203ENST00000503945 SULT1A3P0DMM9 295 aa8.82□□□□□ -1
MED28-203ENST00000503945 SULT1A4P0DMN0 295 aa8.82□□□□□ -1
MED28-203ENST00000503945 SLC25A4P12235 298 aa8.82□□□□□ -1
MED28-203ENST00000503945 ANXA3P12429 323 aa8.82□□□□□ -1
MED28-203ENST00000503945 BSXQ3C1V8 233 aa8.82□□□□□ -1
MED28-203ENST00000503945 MCFD2Q8NI22 146 aa8.82□□□□□ -1
MED28-203ENST00000503945 IL22RA2Q969J5 263 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms