RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 PAFAH1B2P68402 229 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 SURF2Q15527 256 aaPredicted RBP14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 WFDC3Q8IUB2 231 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 FAM219AQ8IW50 185 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 KIR2DL5AQ8N109 375 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 KIR2DL5BQ8NHK3 375 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 LHFPL5Q8TAF8 219 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 DYNC2LI1Q8TCX1 351 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 GLYATL2Q8WU03 294 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 RBPMSQ93062 196 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 ZFAND3Q9H8U3 227 aa14.38□□□□□ -0.11
UBE2D3-215ENST00000503418 DNAH1Q9P2D7 4330 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 CTDSPLO15194 276 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 NOL3O60936 208 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 APOHP02749 345 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 SPCS3P61009 180 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 PMS2P11Q13670 270 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 FAM90A2PQ658T7 463 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 PVRIGQ6DKI7 326 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 LYG2Q86SG7 212 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 FNDC4Q9H6D8 234 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 MAP6D1Q9H9H5 199 aa14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 MRPL36Q9P0J6 103 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-215ENST00000503418 A0A1B0GU03 582 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 CRYM-AS1A6NIL9 109 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 TMBIM6P55061 237 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 CMC4P56277 68 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 RPL11P62913 178 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 DHODHQ02127 395 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 MLANAQ16655 118 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 TMEM268Q5VZI3 342 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 SELENOHQ8IZQ5 122 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 OR51S1Q8NGJ8 323 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 RNF183Q96D59 192 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 PRRT1Q99946 306 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 BCL7BQ9BQE9 202 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 VSIRQ9H7M9 311 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 RABL2AQ9UBK7 228 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 CACNG5Q9UF02 275 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 RABL2BQ9UNT1 228 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 GPR132Q9UNW8 380 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 HYDINQ4G0P3 5121 aa14.36□□□□□ -0.11
UBE2D3-215ENST00000503418 CXorf65A6NEN9 183 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 DNASE2O00115 360 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 CLN5O75503 358 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 SCGB2A1O75556 95 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 DFFBO76075 338 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 CD5P06127 495 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 LILRB2Q8N423 598 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 OR4X1Q8NH49 305 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 OR52E5Q8NH55 327 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 GPR146Q96CH1 333 aa14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 HEYLQ9NQ87 328 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-215ENST00000503418 ANKRD20A5PA0PJZ0 165 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 CEBPZOSA8MTT3 80 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 NXPH3O95157 252 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 NPPCP23582 126 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 HTR2BP41595 481 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 RPL5P46777 297 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 EWSR1Q01844 656 aaKnown RBP eCLIP14.34□□□□□ -0.115e-7■■■■■ 34.3
UBE2D3-215ENST00000503418 TNFRSF9Q07011 255 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 BSXQ3C1V8 233 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 TMEM230Q96A57 120 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 MS4A6AQ9H2W1 248 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 TMEM231Q9H6L2 316 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 MCUBQ9NWR8 336 aa14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 RSL24D1Q9UHA3 163 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-215ENST00000503418 ALMS1Q8TCU4 4167 aa14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 RPS10-NUDT3A0A1W2PQS6 291 aa14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 GSTZ1O43708 216 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 AARDQ4LEZ3 155 aa14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 METTL26Q96S19 204 aa14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 CSTL1Q9H114 145 aa14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 PRR13Q9NZ81 148 aa14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 SCP2D1Q9UJQ7 156 aa14.33□□□□□ -0.12
UBE2D3-215ENST00000503418 TIGITQ495A1 244 aa14.32□□□□□ -0.12
UBE2D3-215ENST00000503418 SLIRPQ9GZT3 109 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-215ENST00000503418 RABAC1Q9UI14 185 aa14.32□□□□□ -0.12
UBE2D3-215ENST00000503418 KCNIP3Q9Y2W7 256 aa14.32□□□□□ -0.12
UBE2D3-215ENST00000503418 A0A1W2PS18 150 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 FABP12A6NFH5 140 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 MPTX1A8MV57 137 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 H3BMQ9 156 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 DEFB131AP59861 70 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 C2orf83Q53S99 150 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 LEMD1Q68G75 181 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 SLC24A4Q8NFF2 622 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 NARS2Q96I59 477 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 SCGB3A2Q96PL1 93 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 TMEM56-RWDD3S4R434 201 aa14.31□□□□□ -0.12
UBE2D3-215ENST00000503418 TRAV30A0A087WSZ9 112 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 NUPR2A6NF83 97 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 IGKV1-17P01599 117 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 SULT1A3P0DMM9 295 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 SULT1A4P0DMN0 295 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 TNFSF8P32971 234 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 RND2P52198 227 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 TMEM187Q14656 261 aa14.3□□□□□ -0.12
UBE2D3-215ENST00000503418 FAM24BQ8N5W8 94 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms