RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 RPS10-NUDT3A0A1W2PQS6 291 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 LINC01619G3V211 115 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 DEDDO75618 318 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 RLN2P04090 185 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 METTL15P1P0C7V9 234 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 ARL3P36405 182 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 MYCNOSP40205 109 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 SLURP1P55000 103 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 ATP5IP56385 69 aaPredicted RBP9.17□□□□□ -0.94
CUX1-210ENST00000497815 TAS2R30P59541 319 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 OR8G2PQ6IF36 304 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 RANGRFQ9HD47 186 aaPredicted RBP9.17□□□□□ -0.94
CUX1-210ENST00000497815 OR5AC2Q9NZP5 309 aa9.17□□□□□ -0.94
CUX1-210ENST00000497815 MRPL36Q9P0J6 103 aaKnown RBP9.17□□□□□ -0.94
CUX1-210ENST00000497815 STAB1Q9NY15 2570 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 FAM24AA6NFZ4 105 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
CUX1-210ENST00000497815 H0YIZ8 118 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 BMPR1BO00238 502 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 TSC22D2O75157 780 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 CCNKO75909 580 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 MPC2O95563 127 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 MFAP4P55083 255 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 CD69Q07108 199 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 SLC16A13Q7RTY0 426 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 ACY3Q96HD9 319 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 C11orf1Q9H5F2 150 aa9.16□□□□□ -0.94
CUX1-210ENST00000497815 IGHV3-35A0A0C4DH35 117 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 E5RGE8 158 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 TGOLN2O43493 480 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 GNG7O60262 68 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 CST7O76096 145 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 OR2C1O95371 312 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 GIPP09681 153 aaPredicted RBP9.15□□□□□ -0.94
CUX1-210ENST00000497815 PET100P0DJ07 73 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 HOXD3P31249 432 aaPredicted RBP9.15□□□□□ -0.94
CUX1-210ENST00000497815 RND2P52198 227 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 FHL3Q13643 280 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 RPEL1Q2QD12 228 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 FAM209BQ5JX69 171 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 ETFRF1Q6IPR1 90 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 PRSS54Q6PEW0 395 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 TMEM14EPQ6UXP3 125 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 CHAC2Q8WUX2 184 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 SLC35E1Q96K37 410 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 CHRDL1Q9BU40 450 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 MBD2Q9UBB5 411 aa9.15□□□□□ -0.94
CUX1-210ENST00000497815 TRAV14DV4A0A0A6YYC5 116 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 IGSF23A1L1A6 192 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 SMCO3A2RU48 225 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 PRSS46E5RG02 174 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 GGCTO75223 188 aaKnown RBP9.14□□□□□ -0.95
CUX1-210ENST00000497815 SLC25A4P12235 298 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 ZP3P21754 424 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 GPX4P36969 197 aaPredicted RBP9.14□□□□□ -0.95
CUX1-210ENST00000497815 NPBWR1P48145 328 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 RAP2BP61225 183 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 Q5BKY6 102 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 ACOT7LQ6ZUV0 252 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 HAPLN4Q86UW8 402 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 TMEM217Q8N7C4 229 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 LINC00482Q8N8I6 264 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 THAP6Q8TBB0 222 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 DCUN1D4Q92564 292 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 NPIPB3Q92617 1050 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
CUX1-210ENST00000497815 BSCL2Q96G97 398 aaPredicted RBP9.14□□□□□ -0.95
CUX1-210ENST00000497815 TXN2Q99757 166 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 RNF126Q9BV68 326 aa9.14□□□□□ -0.95
CUX1-210ENST00000497815 LYRM2Q9NU23 88 aaPredicted RBP9.14□□□□□ -0.95
CUX1-210ENST00000497815 A0A1B0GVG6 124 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 PMS2P5A8MQ11 134 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 NUPL2O15504 423 aaKnown RBP9.13□□□□□ -0.95
CUX1-210ENST00000497815 CLN5O75503 358 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 CTSGP08311 255 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 CD33P20138 364 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 FCGR2BP31994 310 aaPredicted RBP9.13□□□□□ -0.95
CUX1-210ENST00000497815 ADMP35318 185 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 P2RY1P47900 373 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 SYNJ2BPP57105 145 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 ARL16Q0P5N6 197 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 GAMTQ14353 236 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 STX12Q86Y82 276 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 TMEM252Q8N6L7 170 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 OR10P1Q8NGE3 313 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 OR2T35Q8NGX2 323 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 OR4X1Q8NH49 305 aa9.13□□□□□ -0.95
CUX1-210ENST00000497815 GAR1Q9NY12 217 aaKnown RBP9.13□□□□□ -0.95
CUX1-210ENST00000497815 IGHV3OR16-8A0A075B7F1 116 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 ZNF320A2RRD8 509 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 OR10J1P30954 320 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 SULT1A1P50225 295 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 EWSR1Q01844 656 aaKnown RBP eCLIP9.12□□□□□ -0.952e-6■■■□□ 16.3
CUX1-210ENST00000497815 AKR1C1Q04828 323 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 SLC38A11Q08AI6 406 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 TIGITQ495A1 244 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 PRR31Q5SQ13 230 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 SPSB3Q6PJ21 355 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 ASB13Q8WXK3 278 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms