RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 ZNF660Q6AZW8 331 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 APOBEC3HQ6NTF7 200 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 SCIMPQ6UWF3 145 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ALKAL1Q6UXT8 129 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 HEPN1Q6WQI6 88 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMPPEQ6ZT21 453 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 GTF2H5Q6ZYL4 71 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SLC25A26Q70HW3 274 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 FA2HQ7L5A8 372 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MRPL21Q7Z2W9 205 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 COMMD6Q7Z4G1 85 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMEM144Q7Z5S9 345 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SCD5Q86SK9 330 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SNX29P2Q8IUI4 249 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 C20orf196Q8IYI0 205 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SELENOHQ8IZQ5 122 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 HS3ST5Q8IZT8 346 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 HIST3H2BBQ8N257 126 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 LINC00471Q8N535 108 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TCTEX1D1Q8N7M0 179 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SLC35G3Q8N808 338 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 C11orf72Q8NBR9 251 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SLC30A7Q8NEW0 376 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SLC26A10Q8NG04 563 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR8G5Q8NG78 346 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR4K2Q8NGD2 314 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR5AR1Q8NGP9 310 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR6N1Q8NGY5 312 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR5AK3PQ8NH89 298 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR5AK2Q8NH90 309 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CT45A3Q8NHU0 189 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 LINC01560Q8TB33 94 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SFXN5Q8TD22 340 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 GPX8Q8TED1 209 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 DOK4Q8TEW6 326 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMEM106AQ96A25 262 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 RPEQ96AT9 228 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 IMP4Q96G21 291 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 MRAP2Q96G30 205 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMEM56Q96MV1 263 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SCGB3A2Q96PL1 93 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TP53RKQ96S44 253 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 LYSMD1Q96S90 227 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MIEN1Q9BRT3 115 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 PSMG3Q9BT73 122 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMEM243Q9BU79 118 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TAPBPLQ9BX59 468 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ZNF471Q9BX82 626 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 SUCNR1Q9BXA5 334 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SNHG12Q9BXW3 62 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MS4A8Q9BY19 250 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR2J1Q9GZK6 312 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 FXYD6Q9H0Q3 95 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ATG5Q9H1Y0 275 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TXNIPQ9H3M7 391 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 FBXO44Q9H4M3 255 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 METTL17Q9H7H0 456 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 REEP1Q9H902 201 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TAF9BQ9HBM6 251 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 C6orf50Q9HD87 102 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ASF1BQ9NVP2 202 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMEM242Q9NWH2 141 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MS4A12Q9NXJ0 267 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TAS2R5Q9NYW4 299 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 DOK5Q9P104 306 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ABRACLQ9P1F3 81 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CLN8Q9UBY8 286 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 NAT8Q9UHE5 227 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TRAPPC2LQ9UL33 140 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MCTS1Q9ULC4 181 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 Q9Y3F1 56 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TBL2Q9Y4P3 447 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR51B2Q9Y5P1 312 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMEM56-RWDD3S4R434 201 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SRRM2Q9UQ35 2752 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 CMYA5Q8N3K9 4069 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ESPL1Q14674 2120 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 PLXNA4Q9HCM2 1894 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ANK3Q12955 4377 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 PKDREJQ9NTG1 2253 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 IGLV1-50A0A075B6I6 118 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 hCG_1818297A0A087WSY0 165 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 KCNE1BA0A087WTH5 132 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TRAV40A0A0B4J280 105 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 IGHV2OR16-5A0A0B4J2B6 119 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 IGHV1OR15-9A0A0B4J2B8 117 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 A0A0J9YXV3 536 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 A0A1B0GW15 77 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 A0A1B0GW64 132 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TRDV1A0A1B0GX56 115 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR6C6A6NF89 314 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TVP23AA6NH52 213 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SLC22A20A6NK97 555 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 RNASEK-C17orf49H0YIS7 233 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 KLRC4-KLRK1H3BQV0 150 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 K7EPK0 472 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CORTO00230 105 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZNF593O00488 134 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 CXCR6O00574 342 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR7C2O60412 319 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms