RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 SERPINE3A8MV23 424 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 SIRPB1O00241 398 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 FCN3O75636 299 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 VENTXO95231 258 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 IFNA5P01569 189 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 TTRP02766 147 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 PFN1P07737 140 aaKnown RBP3.99□□□□□ -1.77
CSMD3-208ENST00000497026 ESDP10768 282 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 HIST1H1DP16402 221 aaKnown RBP3.99□□□□□ -1.77
CSMD3-208ENST00000497026 MDKP21741 143 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-208ENST00000497026 RHOGP84095 191 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF154Q13106 437 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 MSMO1Q15800 293 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 PRSS8Q16651 343 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 MPV17LQ2QL34 196 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 ABCA11PQ4W5N1 156 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM155Q4W5P6 130 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 CST9LP1Q5W188 147 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF880Q6PDB4 577 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF826PQ6ZT77 177 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 MOGAT3Q86VF5 341 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 C11orf53Q8IXP5 236 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 LGI3Q8N145 548 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 GVQW1Q8N7I0 195 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 NECAP1Q8NC96 275 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 OR10AC1Q8NH08 325 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 VN1R17PQ8TDU5 208 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM37Q8WXS4 190 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM186Q96B77 213 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 GPR146Q96CH1 333 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 TIMD4Q96H15 378 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 RTBDNQ9BSG5 229 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-208ENST00000497026 LPAR5Q9H1C0 372 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 PATZ1Q9HBE1 687 aaKnown RBP3.99□□□□□ -1.77
CSMD3-208ENST00000497026 MANBALQ9NQG1 85 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 CLN8Q9UBY8 286 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 KIAA2026Q5HYC2 2103 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 SETD2Q9BYW2 2564 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-208ENST00000497026 WNK2Q9Y3S1 2297 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 MAP1AP78559 2803 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-208ENST00000497026 PPIAL4EA0A075B759 164 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 ZFP92A6NM28 416 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 CEBPZOSA8MTT3 80 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 PPIAL4DF5H284 164 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM250H0YL14 139 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 TRAPPC2LH3BP13 241 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-208ENST00000497026 J3QR06 171 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 M0QZ24 198 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 OR7C2O60412 319 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 RAMP3O60896 148 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 FSTL3O95633 263 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 CDS2O95674 445 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 WNT2P09544 360 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 STAG3L3P0CL85 134 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 PPIAL4FP0DN26 164 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 GNB3P16520 340 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 SRD5A1P18405 259 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 S100GP29377 79 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 MDH2P40926 338 aaKnown RBP3.98□□□□□ -1.77
CSMD3-208ENST00000497026 PRRX1P54821 245 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 TAS2R30P59541 319 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 PAX2Q02962 417 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 PMCHL1Q16048 86 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 LRRC10Q5BKY1 277 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 DMRTC1Q5HYR2 192 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 WDR25Q64LD2 544 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-208ENST00000497026 OR4A47Q6IF82 309 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 WDR73Q6P4I2 378 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 LYPD2Q6UXB3 125 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF841Q6ZN19 808 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 Q6ZSR3 168 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-208ENST00000497026 MTURNQ8N3F0 131 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 OR2C3Q8N628 320 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 GCSAMQ8N6F7 178 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 SIGLECL1Q8N7X8 197 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 STPG4Q8N801 248 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 LRTM2Q8N967 370 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 DEFB108BQ8NET1 73 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 OR51A4Q8NGJ6 313 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 OR51G1Q8NGK1 321 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 ATP5SQ99766 215 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 HSPB9Q9BQS6 159 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM59Q9BXS4 323 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 PBOV1Q9GZY1 135 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 NAA60Q9H7X0 242 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 WFDC1Q9HC57 220 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 CTSZQ9UBR2 303 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 UBE2J1Q9Y385 318 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-208ENST00000497026 RHBDD3Q9Y3P4 386 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 PPIAL4AQ9Y536 164 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 R4GMQ9 66 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 NF1P21359 2839 aa3.98□□□□□ -1.77
CSMD3-208ENST00000497026 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 TRBV9A0A0B4J1U6 114 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 IGHV2-26A0A0B4J1V2 119 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 PPIAL4CA0A0B4J2A2 164 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 MDFIC2A0A1B0GVS7 189 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms