RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 SLC35F6Q8N357 371 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 UBL4BQ8N7F7 174 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 OR1L8Q8NGR8 309 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 OR10A6Q8NH74 314 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 GRPEL2Q8TAA5 225 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 NUP210Q8TEM1 1887 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-207ENST00000495817 Q8WTZ3 238 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 EEF1AKMT1Q8WVE0 214 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 IMP4Q96G21 291 aaKnown RBP2.72□□□□□ -1.97
CCDC39-207ENST00000495817 UPK3BQ9BT76 320 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 ENY2Q9NPA8 101 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 BIN3Q9NQY0 253 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 VPS29Q9UBQ0 182 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 SCN10AQ9Y5Y9 1956 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 LTBP2Q14767 1821 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 CHD9Q3L8U1 2897 aa2.71□□□□□ -1.97
CCDC39-207ENST00000495817 PLXNB1O43157 2135 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 PLXNB2O15031 1838 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 A0A087WUJ7 227 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 TEX50A0A1B0GTY4 177 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 LOC102725191A0A1B0GVB3 256 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 EXOC1LA0A1B0GW35 172 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 VPS37CA5D8V6 355 aaPredicted RBP2.71□□□□□ -1.98
CCDC39-207ENST00000495817 PRORSD1PA6NEY8 169 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 PPP5D1E7EU14 171 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 CST8O60676 142 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 DEDDO75618 318 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 OR2B3O76000 313 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 ATG12O94817 140 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 REG1AP05451 166 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 SERPINA7P05543 415 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 CRYGDP07320 174 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 CD7P09564 240 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 ATP6V0CP27449 155 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 S100GP29377 79 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 FUSP35637 526 aaKnown RBP eCLIP2.71□□□□□ -1.98
CCDC39-207ENST00000495817 PPP1CCP36873 323 aaKnown RBP2.71□□□□□ -1.98
CCDC39-207ENST00000495817 NAA20P61599 178 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 EBPQ15125 230 aaKnown RBP2.71□□□□□ -1.98
CCDC39-207ENST00000495817 RSU1Q15404 277 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 SURF2Q15527 256 aaPredicted RBP2.71□□□□□ -1.98
CCDC39-207ENST00000495817 HIST3H3Q16695 136 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 SMIM21Q3B7S5 101 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 RPL13AP3Q6NVV1 102 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 SFXN4Q6P4A7 337 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 IDO2Q6ZQW0 420 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 MSRB3Q8IXL7 192 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 ZNF567Q8N184 647 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 C11orf40Q8WZ69 217 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 ZHX1-C8orf76Q96EF9 292 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 PPP1R2P1Q96PQ5 205 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 CMSS1Q9BQ75 279 aaKnown RBP2.71□□□□□ -1.98
CCDC39-207ENST00000495817 GINS3Q9BRX5 216 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 SMDT1Q9H4I9 107 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 UTP11Q9Y3A2 253 aaKnown RBP2.71□□□□□ -1.98
CCDC39-207ENST00000495817 HEY1Q9Y5J3 304 aa2.71□□□□□ -1.98
CCDC39-207ENST00000495817 CHD7Q9P2D1 2997 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 PTPRJQ12913 1337 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 MYH7BA7E2Y1 1941 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 LOC285556D6RIA3 1793 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 C17orf98A8MV24 154 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 ZNF73O43830 326 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-207ENST00000495817 MT-CO2P00403 227 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 CXCL3P19876 107 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 TMEM267Q0VDI3 215 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-207ENST00000495817 LHFPL5Q8TAF8 219 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 ANKRD36BP1Q96IX9 119 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 C12orf57Q99622 126 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 DCSTAMPQ9H295 470 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 IDI2-AS1Q9NZ38 188 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 OPTCQ9UBM4 332 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 HSPE1-MOB4S4R3N1 261 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 HIVEP2P31629 2446 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 DOCK2Q92608 1830 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 ZFHX4Q86UP3 3567 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 LCTP09848 1927 aa2.7□□□□□ -1.98
CCDC39-207ENST00000495817 ZNF407Q9C0G0 2248 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 MGAMO43451 1857 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 TRAV8-1A0A0A6YYK1 113 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 HTR1AP08908 422 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 MYL12AP19105 171 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 CDC42P60953 191 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 HERVK_113P63121 156 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 HPCAP84074 193 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 TNFAIP8L2Q6P589 184 aaPredicted RBP2.69□□□□□ -1.98
CCDC39-207ENST00000495817 C4orf22Q6V702 233 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 ATP5L2Q7Z4Y8 100 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 TMBIM1Q969X1 311 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 C12orf43Q96C57 262 aaKnown RBP2.69□□□□□ -1.98
CCDC39-207ENST00000495817 BTF3L4Q96K17 158 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 C2orf88Q9BSF0 95 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 PKIGQ9Y2B9 76 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 LSM5Q9Y4Y9 91 aaKnown RBP2.69□□□□□ -1.98
CCDC39-207ENST00000495817 PTPRFP10586 1907 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 ATG2AQ2TAZ0 1938 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 DOCK1Q14185 1865 aa2.69□□□□□ -1.98
CCDC39-207ENST00000495817 SIPA1L1O43166 1804 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 DHRS12A0PJE2 317 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms