RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 MRPL36Q9P0J6 103 aaKnown RBP10.55□□□□□ -0.72
PTPN7-217ENST00000495688 APC2O95996 2303 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 TRAV34A0A0B4J273 112 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 hADV38S2A0JD32 116 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 H0YJW9 148 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 CEACAM4O75871 244 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 PLAUP00749 431 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 IRF2P14316 349 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 TAS2R45P59539 299 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 KRTDAPP60985 99 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 C1orf185Q5T7R7 199 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 ZNF833PQ6ZTB9 187 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 OSTCQ9NRP0 149 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 TM4SF5O14894 197 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 GPX1P07203 203 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 PMCHP20382 165 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 SRIP30626 198 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 PPOXP50336 477 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 TDGF1P3P51864 188 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 RPL8P62917 257 aaKnown RBP10.54□□□□□ -0.72
PTPN7-217ENST00000495688 RUSC1-AS1Q66K80 236 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 ASH1LQ9NR48 2969 aaKnown RBP10.54□□□□□ -0.72
PTPN7-217ENST00000495688 LINC00312Q9Y6C7 94 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 ARL2-SNX15V9GYD0 113 aa10.54□□□□□ -0.72
PTPN7-217ENST00000495688 ISLRO14498 428 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 REG1AP05451 166 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 TNFSF4P23510 183 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 SIGLECL1Q8N7X8 197 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 NPIPB3Q92617 1050 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 TBL2Q9Y4P3 447 aaKnown RBP10.53□□□□□ -0.72
PTPN7-217ENST00000495688 CEP295Q9C0D2 2601 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 A0A1W2PRE2 83 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 BMPR1BO00238 502 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 ZNF253O75346 499 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 TEX36Q5VZQ5 186 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 TMEM200BQ69YZ2 307 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 PATE2Q6UY27 113 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 SGK494Q96LW2 274 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 DNAJC4Q9NNZ3 241 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
PTPN7-217ENST00000495688 TRBV9A0A0B4J1U6 114 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 A6NNC1 897 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 AMTP48728 403 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 FAM19A2Q8N3H0 131 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 Q8N976 141 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 OSR1Q8TAX0 266 aaPredicted RBP10.52□□□□□ -0.72
PTPN7-217ENST00000495688 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.72
PTPN7-217ENST00000495688 FLYWCH2Q96CP2 140 aaKnown RBP10.52□□□□□ -0.72
PTPN7-217ENST00000495688 RITA1Q96K30 269 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 VAMP8Q9BV40 100 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.72
PTPN7-217ENST00000495688 SMIM27A0A1W2PRY6 76 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 A0A1W2PS18 150 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 DLL1O00548 723 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 APOA2P02652 100 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 APELAP0DMC3 54 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 BRS3P32247 399 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.73
PTPN7-217ENST00000495688 SLAQ13239 276 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF124Q15973 351 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 LYPD2Q6UXB3 125 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 C19orf35Q6ZS72 473 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 OR5AN1Q8NGI8 311 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 RBM14Q96PK6 669 aaKnown RBP10.52□□□□□ -0.73
PTPN7-217ENST00000495688 NRN1Q9NPD7 142 aa10.52□□□□□ -0.73
PTPN7-217ENST00000495688 PRB3Q04118 309 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-217ENST00000495688 PRR27Q6MZM9 219 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 WFDC8Q8IUA0 241 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 PNKDQ8N490 385 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF714Q96N38 554 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 AMMECR1Q9Y4X0 333 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-217ENST00000495688 COX7A2P2O60397 106 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 CASP6P55212 293 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 DLX1P56177 255 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 GNG5P63218 68 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 OR10X1Q8NGY0 326 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 CCL17Q92583 94 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 C20orf144Q9BQM9 153 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 MIEN1Q9BRT3 115 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 C19orf24Q9BVV8 132 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 GAL3ST2Q9H3Q3 398 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-217ENST00000495688 IGKV1D-37A0A075B6S9 117 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 IGHV3-72A0A0B4J1Y9 119 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 MT-ND6P03923 174 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 AMY1AP04745 511 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 ADIPOQQ15848 244 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 BATFQ16520 125 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 WDR73Q6P4I2 378 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 Q6ZS92 163 aa10.51□□□□□ -0.73
PTPN7-217ENST00000495688 DIRC3C9JPN6 131 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 C3orf36Q3SXR2 165 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 TMEM177Q53S58 311 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 C10orf113Q5VZT2 155 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 RBMXL3Q8N7X1 1067 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms