RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RBPMS2Q6ZRY4 209 aaKnown RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 ZNF833PQ6ZTB9 187 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 SLC25A42Q86VD7 318 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 TGIF2LXQ8IUE1 241 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 SGPP2Q8IWX5 399 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 MMD2Q8IY49 270 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 CCDC71LQ8N9Z2 235 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 UXS1Q8NBZ7 420 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 OR51H1Q8NH63 302 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 RTN4IP1Q8WWV3 396 aaPredicted RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 ZNF486Q96H40 463 aaPredicted RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 RCHY1Q96PM5 261 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 MARVELD1Q9BSK0 173 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 C20orf85Q9H1P6 137 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 ZNF256Q9Y2P7 627 aaPredicted RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 PYGO1Q9Y3Y4 419 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 SMAD5-AS1Q9Y6J3 95 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 DNAH7Q8WXX0 4024 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 HYDINQ4G0P3 5121 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 IGHV1-3A0A0C4DH29 117 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 LCE6AA0A183 80 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 C3orf85A0A1B0GTC6 90 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 CRYM-AS1A6NIL9 109 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 NCBP2LA6PVI3 153 aaKnown RBP4.89□□□□□ -1.63
VIM-207ENST00000495528 H7C2Y5 167 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 FCGR3BO75015 233 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 OR4E1P0C645 316 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 F2RP25116 425 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 DUTP33316 252 aaKnown RBP4.89□□□□□ -1.63
VIM-207ENST00000495528 DHODHQ02127 395 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 ZNF816Q0VGE8 651 aaPredicted RBP4.89□□□□□ -1.63
VIM-207ENST00000495528 PPP1R1AQ13522 171 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 EIF4EBP1Q13541 118 aaPredicted RBP4.89□□□□□ -1.63
VIM-207ENST00000495528 EBI3Q14213 229 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 OXA1LQ15070 435 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 C14orf177Q52M58 125 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 TMEM128Q5BJH2 165 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 Q8N9W7 124 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 OR52B4Q8NGK2 314 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 CASTOR1Q8WTX7 329 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 TCTEX1D2Q8WW35 142 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 TMEM230Q96A57 120 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 HSD17B10Q99714 261 aaKnown RBP4.89□□□□□ -1.63
VIM-207ENST00000495528 NABP2Q9BQ15 211 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 SEC22CQ9BRL7 303 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 MRPL20Q9BYC9 149 aaKnown RBP4.89□□□□□ -1.63
VIM-207ENST00000495528 ALX4Q9H161 411 aaPredicted RBP4.89□□□□□ -1.63
VIM-207ENST00000495528 SLC2A9Q9NRM0 540 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 PLSCR3Q9NRY6 295 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 CACNG5Q9UF02 275 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 WDR83OSQ9Y284 106 aa4.89□□□□□ -1.63
VIM-207ENST00000495528 STAB2Q8WWQ8 2551 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 A0A087WW49 117 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 C9orf170A2RU37 121 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 DFFBO76075 338 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 SFT2D2O95562 160 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 IL5P05113 134 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 SERPINE2P07093 398 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 OR5AC1P0C628 307 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 RPA2P15927 270 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 ZNF137PP52743 207 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 TAS2R31P59538 309 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 RND3P61587 244 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 SUPT4H1P63272 117 aaKnown RBP4.88□□□□□ -1.63
VIM-207ENST00000495528 CATR1Q13166 79 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 CBX3Q13185 183 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 KIAA0141Q14154 515 aaPredicted RBP4.88□□□□□ -1.63
VIM-207ENST00000495528 MSMO1Q15800 293 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 CST9LP1Q5W188 147 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 ZFAND6Q6FIF0 208 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 KCTD9Q7L273 389 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 LYG2Q86SG7 212 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 SPAG16Q8N0X2 631 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 OR8H3Q8N146 312 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 Q8N6K4 173 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 MINDY2Q8NBR6 621 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 OR11H1Q8NG94 326 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 GLYATL2Q8WU03 294 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 ADTRPQ96IZ2 230 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 TP53RKQ96S44 253 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 HSPB9Q9BQS6 159 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 NAA60Q9H7X0 242 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 GPN1Q9HCN4 374 aaPredicted RBP4.88□□□□□ -1.63
VIM-207ENST00000495528 SLC35D1Q9NTN3 355 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 PRELID3BQ9Y3B1 194 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 ALG5Q9Y673 324 aa4.88□□□□□ -1.63
VIM-207ENST00000495528 A0A087X002 238 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 A0A1B0GVG6 124 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 H0YJW9 148 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 CRYZL1O95825 349 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 KRASP01116 189 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 IGHG4P01861 327 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 HLA-AP01891 365 aaKnown RBP4.87□□□□□ -1.63
VIM-207ENST00000495528 APOA2P02652 100 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 RRASP10301 218 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 ANXA3P12429 323 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 CD1BP29016 333 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 INSL3P51460 131 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 UBE2MP61081 183 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms