RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 AURKAIP1Q9NWT8 199 aaPredicted RBP10.31□□□□□ -0.76
COL1A1-208ENST00000494334 GAR1Q9NY12 217 aaKnown RBP10.31□□□□□ -0.76
COL1A1-208ENST00000494334 SIGLEC8Q9NYZ4 499 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 MRPL36Q9P0J6 103 aaKnown RBP10.31□□□□□ -0.76
COL1A1-208ENST00000494334 NOTCH1P46531 2555 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 ZNF320A2RRD8 509 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 CCSO14618 274 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 NKX2-1P43699 371 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-208ENST00000494334 NPBWR1P48145 328 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 IAH1Q2TAA2 248 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-208ENST00000494334 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 ADAMTSL5Q6ZMM2 481 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 HAPLN4Q86UW8 402 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 ZNF414Q96IQ9 312 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 MARVELD1Q9BSK0 173 aa10.3□□□□□ -0.76
COL1A1-208ENST00000494334 ZMAT5Q9UDW3 170 aaKnown RBP10.3□□□□□ -0.76
COL1A1-208ENST00000494334 RPS10-NUDT3A0A1W2PQS6 291 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 C2orf70A6NJV1 201 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 WRBO00258 174 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 NDUFA4O00483 81 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 NUPL2O15504 423 aaKnown RBP10.29□□□□□ -0.76
COL1A1-208ENST00000494334 GNG7O60262 68 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 TMEM50AO95807 157 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 SPNP16150 400 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 EDN2P20800 178 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 ATP5IP56385 69 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-208ENST00000494334 POLR2GP62487 172 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL1A1-208ENST00000494334 ZBTB8BQ8NAP8 495 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-208ENST00000494334 OR4X1Q8NH49 305 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 CIB3Q96Q77 187 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-208ENST00000494334 GPN1Q9HCN4 374 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-208ENST00000494334 GSKIPQ9P0R6 139 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 DNAH3Q8TD57 4116 aa10.29□□□□□ -0.76
COL1A1-208ENST00000494334 WI2-2373I1.2A0A1W2PRP0 233 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 TMEM213A2RRL7 107 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 C15orf62A8K5M9 175 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 A8MWP6 167 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 PRAF2O60831 178 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 CLN5O75503 358 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 TMEM190Q8WZ59 177 aa10.28□□□□□ -0.76
COL1A1-208ENST00000494334 C5orf51A6NDU8 294 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 SNRPGP15A8MWD9 76 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 FAM25EA8MYX2 175 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 LY86O95711 162 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 SCGB1D2O95969 90 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 IFNA4P05014 189 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 SLC25A4P12235 298 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 FOLR2P14207 255 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 CBLN1P23435 193 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 ELLP55199 621 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-208ENST00000494334 RELQ04864 619 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-208ENST00000494334 CD69Q07108 199 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 ETFRF1Q6IPR1 90 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 CACNG8Q8WXS5 425 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 PALMDQ9NP74 551 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 ZNF256Q9Y2P7 627 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-208ENST00000494334 UFC1Q9Y3C8 167 aa10.27□□□□□ -0.77
COL1A1-208ENST00000494334 K7EIL1 84 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 MBPP02686 304 aaPredicted RBP10.26□□□□□ -0.77
COL1A1-208ENST00000494334 C8orf88P0DMB2 117 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 RND2P52198 227 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 PAX9P55771 341 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 RAB11AP62491 216 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 RPP30P78346 268 aaKnown RBP10.26□□□□□ -0.77
COL1A1-208ENST00000494334 SPANXN5Q5MJ07 72 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 SLC16A13Q7RTY0 426 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 C2orf50Q96LR7 162 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 PRR25Q96S07 402 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 PSENENQ9NZ42 101 aa10.26□□□□□ -0.77
COL1A1-208ENST00000494334 PAIP2BQ9ULR5 123 aaKnown RBP10.26□□□□□ -0.77
COL1A1-208ENST00000494334 IGHV3OR16-8A0A075B7F1 116 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 TRAV30A0A087WSZ9 112 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 H3BP45 60 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 K7EMT4 169 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 SSSCA1O60232 199 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 YIF1AO95070 293 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 PTTG1O95997 202 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 GPX4P36969 197 aaPredicted RBP10.25□□□□□ -0.77
COL1A1-208ENST00000494334 IL15RAQ13261 267 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
COL1A1-208ENST00000494334 GSG1LQ6UXU4 331 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 ZNF600Q6ZNG1 722 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 MRAPQ8TCY5 172 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 SMIM8Q96KF7 97 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 C20orf24Q9BUV8 137 aa10.25□□□□□ -0.77
COL1A1-208ENST00000494334 DAZ1Q9NQZ3 744 aaKnown RBP10.25□□□□□ -0.77
COL1A1-208ENST00000494334 MRPL27Q9P0M9 148 aaKnown RBP10.25□□□□□ -0.77
COL1A1-208ENST00000494334 RCL1Q9Y2P8 373 aaKnown RBP10.25□□□□□ -0.77
COL1A1-208ENST00000494334 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
COL1A1-208ENST00000494334 IZUMO1RA6ND01 250 aa10.24□□□□□ -0.77
COL1A1-208ENST00000494334 PRSS46E5RG02 174 aa10.24□□□□□ -0.77
COL1A1-208ENST00000494334 ZNF207O43670 478 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 463.5 ms