RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 VPS13CQ709C8 3753 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 HEATR1Q9H583 2144 aaKnown RBP9.55□□□□□ -0.88
BRCA1-222ENST00000493919 PDZD2O15018 2839 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 MUC21A0A0G2JKD1 596 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 MUC21A0A140T8X8 626 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF785A8K8V0 405 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 SHISA9B4DS77 424 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 FNDC10F2Z333 226 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 HSBP1O75506 76 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 MALP21145 153 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 FABP6P51161 128 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 TNFAIP6P98066 277 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF672Q499Z4 452 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-222ENST00000493919 MUC21Q5SSG8 566 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 RPL7L1Q6DKI1 246 aaKnown RBP9.54□□□□□ -0.88
BRCA1-222ENST00000493919 Q6ZUT4 128 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 OR4C16Q8NGL9 310 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 OR4C12Q96R67 309 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 MTFP1Q9UDX5 166 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 AKAP9Q99996 3911 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 PLCE1Q9P212 2302 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 LILRA1O75019 489 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 SRD5A1P18405 259 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 EMP1P54849 157 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 PCBD1P61457 104 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF584Q8IVC4 421 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 OR51G1Q8NGK1 321 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 RPEQ96AT9 228 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 S100A16Q96FQ6 103 aaKnown RBP9.54□□□□□ -0.88
BRCA1-222ENST00000493919 OR2H1Q9GZK4 316 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 MANBALQ9NQG1 85 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 CISD1Q9NZ45 108 aaKnown RBP9.54□□□□□ -0.88
BRCA1-222ENST00000493919 KLK11Q9UBX7 282 aa9.54□□□□□ -0.88
BRCA1-222ENST00000493919 MEGF11A6BM72 1044 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 MEIS3P1A6NDR6 274 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 OR4C46A6NHA9 309 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 C9JAW5 83 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 KBTBD11O94819 623 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 LIMS3P0CW19 117 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 LIMS4P0CW20 117 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 PTHLHP12272 177 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 G6PCP35575 357 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 RPS27P42677 84 aaKnown RBP9.53□□□□□ -0.88
BRCA1-222ENST00000493919 C3orf36Q3SXR2 165 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 VAX1Q5SQQ9 334 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 STUMQ69YW2 141 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 OR8S1Q8NH09 359 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 PLPPR1Q8TBJ4 325 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 RBMXL1Q96E39 390 aaKnown RBP9.53□□□□□ -0.88
BRCA1-222ENST00000493919 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 SEC22AQ96IW7 307 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 CCL19Q99731 98 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 HIGD1AQ9Y241 93 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 SPCS1Q9Y6A9 102 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 MAP1AP78559 2803 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-222ENST00000493919 CCDC168Q8NDH2 2452 aa9.53□□□□□ -0.88
BRCA1-222ENST00000493919 TRGV10A0A0A0MS01 117 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 A0A1W2PPI3 338 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 IFNL4K9M1U5 179 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF823P16415 610 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 PPIFP30405 207 aaKnown RBP9.52□□□□□ -0.88
BRCA1-222ENST00000493919 PRDX2P32119 198 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 MEF2CQ06413 473 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-222ENST00000493919 Q6Q795 121 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 DUX4L9Q6RFH8 374 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-222ENST00000493919 CYB561D1Q8N8Q1 229 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 OR10G7Q8NGN6 311 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 BAALCQ8WXS3 180 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 OR5P3Q8WZ94 311 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 PMCHL2Q9BQD1 86 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 RPRMQ9NS64 109 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 OR5V1Q9UGF6 321 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 ST6GALNAC2Q9UJ37 374 aa9.52□□□□□ -0.88
BRCA1-222ENST00000493919 FOXA2Q9Y261 457 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-222ENST00000493919 RAI1Q7Z5J4 1906 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-222ENST00000493919 SAA2-SAA4A0A096LPE2 208 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 C5orf49A4QMS7 147 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 E7EQL1 145 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 RHODO00212 210 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 CRYBB3P26998 211 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 NDUFV3P56181 108 aaKnown RBP9.52□□□□□ -0.89
BRCA1-222ENST00000493919 Q6AWC8 147 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 PPP1R27Q86WC6 154 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 OR2AJ1Q8NGZ0 328 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 OR2T10Q8NGZ9 312 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 ATP6V0E2Q8NHE4 81 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 MBD3L1Q8WWY6 194 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 LIN7CQ9NUP9 197 aaKnown RBP9.52□□□□□ -0.89
BRCA1-222ENST00000493919 FBXL7Q9UJT9 491 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 LHFPL6Q9Y693 200 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 PXMP4Q9Y6I8 212 aa9.52□□□□□ -0.89
BRCA1-222ENST00000493919 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 FABP2P12104 132 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms